RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TAS2R43P59537 309 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 PPP2CBP62714 309 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 PPP2CAP67775 309 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 MRPL28Q13084 256 aaKnown RBP10.78□□□□□ -0.68
LINC01001-201ENST00000526704 FCN2Q15485 313 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 SLC36A2Q495M3 483 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 BICRALQ6AI39 1079 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 DMKNQ6E0U4 476 aaPredicted RBP10.78□□□□□ -0.68
LINC01001-201ENST00000526704 FAAH2Q6GMR7 532 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 BMP8AQ7Z5Y6 402 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 BPHLQ86WA6 291 aaPredicted RBP10.78□□□□□ -0.68
LINC01001-201ENST00000526704 C9orf62Q8N4C0 152 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 BMPERQ8N8U9 685 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 CYB561A3Q8NBI2 242 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 TMEM52Q8NDY8 209 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 OR1E3Q8WZA6 343 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 FAM131CQ96AQ9 280 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 IRF2BPLQ9H1B7 796 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 SRMSQ9H3Y6 488 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 DUSP22Q9NRW4 184 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 GDE1Q9NZC3 331 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 MED31Q9Y3C7 131 aa10.78□□□□□ -0.68
LINC01001-201ENST00000526704 TBC1D3EA0A087X179 549 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 GXYLT2A0PJZ3 443 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 C7orf66A4D0T2 115 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 PTP4A3O75365 173 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 GYPBP06028 91 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 TLX1P31314 330 aaPredicted RBP10.77□□□□□ -0.68
LINC01001-201ENST00000526704 C19orf57Q0VDD7 668 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 EXOSC7Q15024 291 aaKnown RBP10.77□□□□□ -0.68
LINC01001-201ENST00000526704 NTRK2Q16620 822 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 FAM205BPQ63HN1 556 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 PYHIN1Q6K0P9 492 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 CREB3L2Q70SY1 520 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 PRSS41Q7RTY9 318 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 ZAR1Q86SH2 424 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 SIX5Q8N196 739 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 OR5H6Q8NGV6 325 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 OR51A7Q8NH64 312 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 CCL4L1Q8NHW4 92 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 GRHL3Q8TE85 626 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.77□□□□□ -0.68
LINC01001-201ENST00000526704 KLHL1Q9NR64 748 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 USP36Q9P275 1121 aaKnown RBP10.77□□□□□ -0.68
LINC01001-201ENST00000526704 ST6GALNAC2Q9UJ37 374 aa10.77□□□□□ -0.68
LINC01001-201ENST00000526704 MPDZO75970 2070 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 TRBV23OR9-2A0A075B6M9 112 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 TRAV6A0A075B6T7 132 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 A0A087WV62 115 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 LOC105369274A0A096LPK9 316 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 POM121BA6NF01 834 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 FZD7O75084 574 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 ATP1B1P05026 303 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 CT62P0C5K7 136 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 UGT2B7P16662 529 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 ZNF3P17036 446 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 MAP3K8P41279 467 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 FHL1Q13642 323 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 PRRT3Q5FWE3 981 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 CDK20Q8IZL9 346 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 OR4N4Q8N0Y3 316 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 CDRT4Q8N9R6 151 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 SCMH1Q96GD3 660 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 STACQ99469 402 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 C1QTNF7Q9BXJ2 289 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 TTTY10Q9BZA0 68 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 SFXN1Q9H9B4 322 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 NUDT15Q9NV35 164 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 FLRT3Q9NZU0 649 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 HEATR5AQ86XA9 2040 aa10.77□□□□□ -0.69
LINC01001-201ENST00000526704 A0A0B4J2E0 115 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 A0A1B0GX12 115 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 SYNDIG1LA6NDD5 238 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 TNFSF14O43557 240 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 BRINP1O60477 761 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 ICMTO60725 284 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 NGFRP08138 427 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 NRG3P56975 720 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 MGAT2Q10469 447 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 PRICKLE4Q2TBC4 344 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 ACSM3Q53FZ2 586 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 ZNF613Q6PF04 617 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 ZNF767PQ75MW2 155 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 KRT74Q7RTS7 529 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 GHDCQ8N2G8 530 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 SLC44A3Q8N4M1 653 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 GHSRQ92847 366 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 YIPF5Q969M3 257 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 HYLS1Q96M11 299 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 TWSG1Q9GZX9 223 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 GHITMQ9H3K2 345 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 SLCO1C1Q9NYB5 712 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 HAO2Q9NYQ3 351 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 MAT2BQ9NZL9 334 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 PILRAQ9UKJ1 303 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 CA5BQ9Y2D0 317 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 TP53BP1Q12888 1972 aaPredicted RBP10.76□□□□□ -0.69
LINC01001-201ENST00000526704 TBC1D3DA0A087WVF3 549 aa10.76□□□□□ -0.69
LINC01001-201ENST00000526704 TBC1D3IA0A087WXS9 549 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms