RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PNPP00491 289 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 HPP00738 406 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 APOEP02649 317 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 MT-ND1P03886 318 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 DCNP07585 359 aaKnown RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 TPM1P09493 284 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 FAM228BP0C875 321 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 GZMAP12544 262 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 HSD17B1P14061 328 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 SELEP16581 610 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 GPX3P22352 226 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 PPP2R1BP30154 601 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 SDC4P31431 198 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 RDXP35241 583 aaKnown RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 CASP3P42574 277 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 MATKP42679 507 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 ALDH3B1P43353 468 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 MAGEA9P43362 315 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 ZFP36L2P47974 494 aaKnown RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 TNFSF10P50591 281 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 OGDHQ02218 1023 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 NME3Q13232 169 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 SIX1Q15475 284 aaPredicted RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 WSCD2Q2TBF2 565 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 CNPY1Q3B7I2 92 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 CCDC14Q49A88 953 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 MS4A13Q5J8X5 152 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 FAM182AQ5T1J6 154 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 AGAP7PQ5VUJ5 663 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 PPP1R2P3Q6NXS1 205 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 EMBQ6PCB8 327 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 RFWD3Q6PCD5 774 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 Q6ZRG5 221 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 Q6ZS52 159 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 TPGS1Q6ZTW0 290 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 ARCQ7LC44 396 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 TIPARPQ7Z3E1 657 aaKnown RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 C17orf64Q86WR6 236 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 TMEM25Q86YD3 366 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 SERPINA12Q8IW75 414 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 STHQ8IWL8 128 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 SAMD12Q8N8I0 201 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 OR6M1Q8NGM8 313 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 OR4A16Q8NH70 328 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 WFDC5Q8TCV5 224 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 FAM172AQ8WUF8 416 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 RXFP2Q8WXD0 754 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 NT5C3BQ969T7 300 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 CLDN23Q96B33 292 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 RUNDC3BQ96NL0 473 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 MCEEQ96PE7 176 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 XPO6Q96QU8 1125 aaKnown RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 S1PR3Q99500 378 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 BBS2Q9BXC9 721 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 ZDHHC6Q9H6R6 413 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 MED4Q9NPJ6 270 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 PIGVQ9NUD9 493 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 DDIT4Q9NX09 232 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 AKAP7Q9P0M2 348 aaPredicted RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 ERVK-18Q9QC07 812 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 UBQLN2Q9UHD9 624 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 CLEC4EQ9ULY5 219 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 FBXO7Q9Y3I1 522 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 SNX10Q9Y5X0 201 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 BZW2Q9Y6E2 419 aaKnown RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 SMAD5-AS1Q9Y6J3 95 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 A0A0C4DFX4 3053 aa3.11□□□□□ -1.91
CD44-219ENST00000525685 NYNRINQ9P2P1 1898 aaKnown RBP3.11□□□□□ -1.91
CD44-219ENST00000525685 MYO10Q9HD67 2058 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 CUL9Q8IWT3 2517 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 TMEM110-MUSTN1A8MSY1 372 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 F5H5T6 163 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 K7EQS6 105 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 TBL1XO60907 577 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 KERAO60938 352 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 APODP05090 189 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 FHP07954 510 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 OR9G9P0C7N8 305 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 CISD3P0C7P0 127 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 SLC2A3P11169 496 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 TDGF1P13385 188 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 GATA1P15976 413 aaPredicted RBP3.1□□□□□ -1.91
CD44-219ENST00000525685 UGT1A6P19224 532 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 HLA-DPA1P20036 260 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 PSMA2P25787 234 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 CCR1P32246 355 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 CD70P32970 193 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 RPS9P46781 194 aaKnown RBP3.1□□□□□ -1.91
CD44-219ENST00000525685 UCP2P55851 309 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 RPS24P62847 133 aaKnown RBP3.1□□□□□ -1.91
CD44-219ENST00000525685 CDKL1Q00532 357 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 ZFP36L1Q07352 338 aaKnown RBP3.1□□□□□ -1.91
CD44-219ENST00000525685 C17orf67Q0P5P2 114 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 PPP1R8Q12972 351 aaKnown RBP3.1□□□□□ -1.91
CD44-219ENST00000525685 SLC17A1Q14916 467 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 ANGPT1Q15389 498 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 P2RY14Q15391 338 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 CARTPTQ16568 116 aa3.1□□□□□ -1.91
CD44-219ENST00000525685 SLC25A52Q3SY17 297 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms