RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 SLC6A13Q9NSD5 602 aa15.7■□□□□ 0.1
NR1H3-228ENST00000525441 ACER3Q9NUN7 267 aa15.7■□□□□ 0.1
NR1H3-228ENST00000525441 FAM53CQ9NYF3 392 aa15.7■□□□□ 0.1
NR1H3-228ENST00000525441 A6NNC1 897 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 EFNA2O43921 213 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 SS18L1O75177 396 aaPredicted RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 CTAG2O75638 210 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 GOSR1O95249 250 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 DBIP07108 87 aaKnown RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 SHC1P29353 583 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 CD79BP40259 229 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 CRISP3P54108 245 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 SESN3P58005 492 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 DSTNP60981 165 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 MERTKQ12866 999 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 SQLEQ14534 574 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 DAZAP2Q15038 168 aaPredicted RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 BLOC1S3Q6QNY0 202 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 CDH24Q86UP0 819 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 PEX5LQ8IYB4 626 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 OR6K3Q8NGY3 331 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 LINC01560Q8TB33 94 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 WDR60Q8WVS4 1066 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 SPDL1Q96EA4 605 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 DACH2Q96NX9 599 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 QRSL1Q9H0R6 528 aaKnown RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 OPN3Q9H1Y3 402 aaPredicted RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 RABEP2Q9H5N1 569 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 CACYBPQ9HB71 228 aaKnown RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 DNAJB12Q9NXW2 375 aaKnown RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 ELOVL5Q9NYP7 299 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 NDRG3Q9UGV2 375 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 SPIN1Q9Y657 262 aaPredicted RBP15.69■□□□□ 0.1
NR1H3-228ENST00000525441 SPG11Q96JI7 2443 aa15.69■□□□□ 0.1
NR1H3-228ENST00000525441 HEATR5AQ86XA9 2040 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 CCDC168Q8NDH2 2452 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 A0A096LPI6 279 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 NR5A2O00482 541 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 CGAP01215 116 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 ETFAP13804 333 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 UQCRBP14927 111 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 IL7RP16871 459 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 RYKP34925 604 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 KCNJ5P48544 419 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 MVDP53602 400 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 RNPS1Q15287 305 aaKnown RBP15.68■□□□□ 0.1
NR1H3-228ENST00000525441 ZNF239Q16600 458 aaKnown RBP15.68■□□□□ 0.1
NR1H3-228ENST00000525441 GTDC1Q4AE62 458 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 SLC2A7Q6PXP3 512 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 PLEKHM3Q6ZWE6 761 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 HMGN2P46Q86SG4 172 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 SLC25A43Q8WUT9 341 aaPredicted RBP15.68■□□□□ 0.1
NR1H3-228ENST00000525441 AURKBQ96GD4 344 aaPredicted RBP15.68■□□□□ 0.1
NR1H3-228ENST00000525441 SIKE1Q9BRV8 207 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 POLDIP3Q9BY77 421 aaKnown RBP15.68■□□□□ 0.1
NR1H3-228ENST00000525441 PAIP1Q9H074 479 aaKnown RBP15.68■□□□□ 0.1
NR1H3-228ENST00000525441 FANCFQ9NPI8 374 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 RASSF1Q9NS23 344 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 CCDC167Q9P0B6 97 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 CLEC4AQ9UMR7 237 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 TRIM33Q9UPN9 1127 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 PCDHB14Q9Y5E9 798 aa15.68■□□□□ 0.1
NR1H3-228ENST00000525441 MPDZO75970 2070 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 SH3D21A4FU49 640 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 CLIC1O00299 241 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 CASKO14936 926 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 EDF1O60869 148 aaKnown RBP15.67■□□□□ 0.1
NR1H3-228ENST00000525441 NID1P14543 1247 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 POU2F1P14859 743 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 RPS4Y1P22090 263 aaKnown RBP15.67■□□□□ 0.1
NR1H3-228ENST00000525441 APOBEC1P41238 236 aaKnown RBP15.67■□□□□ 0.1
NR1H3-228ENST00000525441 RAC3P60763 192 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 FADDQ13158 208 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 AGKQ53H12 422 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 FBXW10Q5XX13 1052 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 ZNF474Q6S9Z5 364 aaPredicted RBP15.67■□□□□ 0.1
NR1H3-228ENST00000525441 GRINAQ7Z429 371 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 FUNDC1Q8IVP5 155 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 ZNF440Q8IYI8 595 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 RNF128Q8TEB7 428 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 ROBO4Q8WZ75 1007 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 CNOT9Q92600 299 aaKnown RBP15.67■□□□□ 0.1
NR1H3-228ENST00000525441 ZNF524Q96C55 264 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 GPATCH1Q9BRR8 931 aaKnown RBP15.67■□□□□ 0.1
NR1H3-228ENST00000525441 CLEC4MQ9H2X3 399 aaPredicted RBP15.67■□□□□ 0.1
NR1H3-228ENST00000525441 COQ10BQ9H8M1 238 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 PLSCR4Q9NRQ2 329 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 TACC2O95359 2948 aa15.67■□□□□ 0.1
NR1H3-228ENST00000525441 ANKRD17O75179 2603 aaKnown RBP15.66■□□□□ 0.1
NR1H3-228ENST00000525441 FAM221AA4D161 298 aa15.66■□□□□ 0.1
NR1H3-228ENST00000525441 CLDN24A6NM45 220 aa15.66■□□□□ 0.1
NR1H3-228ENST00000525441 BCAS1O75363 584 aaPredicted RBP15.66■□□□□ 0.1
NR1H3-228ENST00000525441 BCHEP06276 602 aa15.66■□□□□ 0.1
NR1H3-228ENST00000525441 TFPTP0C1Z6 253 aa15.66■□□□□ 0.1
NR1H3-228ENST00000525441 NCF2P19878 526 aaPredicted RBP15.66■□□□□ 0.1
NR1H3-228ENST00000525441 PPIBP23284 216 aaKnown RBP15.66■□□□□ 0.1
NR1H3-228ENST00000525441 FKBP2P26885 142 aaKnown RBP15.66■□□□□ 0.1
NR1H3-228ENST00000525441 HTR3AP46098 478 aa15.66■□□□□ 0.1
NR1H3-228ENST00000525441 FAM27E3Q08E93 113 aa15.66■□□□□ 0.1
NR1H3-228ENST00000525441 RGNQ15493 299 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms