RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TNFRSF11BO00300 401 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 GADD45GO95257 159 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 THRBP10828 461 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 DPP4P27487 766 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 RFC3P40938 356 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 SLC1A3P43003 542 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 DSCR4P56555 118 aaPredicted RBP14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 SESN3P58005 492 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 FOXO1Q12778 655 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 TRAM2Q15035 370 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 TOMM20Q15388 145 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 LINC00303Q3SY05 128 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 ALG10BQ5I7T1 473 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 COLEC12Q5KU26 742 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 SWT1Q5T5J6 900 aaKnown RBP14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 HMBOX1Q6NT76 420 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 ULK3Q6PHR2 472 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 GDF7Q7Z4P5 450 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 OR52J3Q8NH60 311 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 DNAJA4Q8WW22 397 aaPredicted RBP14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 C3orf49Q96BT1 292 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 CENPNQ96H22 339 aaPredicted RBP14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 TTTY12Q9BZ98 90 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 ADNPQ9H2P0 1102 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 TUBD1Q9UJT1 453 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 U3KQV3 271 aa14.39□□□□□ -0.11
TSPAN4-213ENST00000524895 A0A1W2PRQ8 180 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 ACOT7O00154 380 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 CHP2O43745 196 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 PRKCAP17252 672 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 HK1P19367 917 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 TCEA1P23193 301 aaKnown RBP14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 MST1P26927 711 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 GDF1P27539 372 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 SRD5A2P31213 254 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 HTR3AP46098 478 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 FOXF1Q12946 379 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 DGCR6Q14129 220 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 PLPPR5Q32ZL2 321 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 C19orf48Q6RUI8 117 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 Q6ZS92 163 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 GRINAQ7Z429 371 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 ZFP62Q8NB50 900 aaPredicted RBP14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 ICA1LQ8NDH6 482 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 ZBTB8AQ96BR9 441 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 DHRS1Q96LJ7 313 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 EPYCQ99645 322 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 MFRPQ9BY79 579 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 ANKRD19PQ9H560 264 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 ZNF703Q9H7S9 590 aaPredicted RBP14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 ACER3Q9NUN7 267 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 VNN3Q9NY84 501 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 NKX1-2Q9UD57 310 aaPredicted RBP14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 TMCC3Q9ULS5 477 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 LYVE1Q9Y5Y7 322 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 LOC400499M0QZD8 3231 aa14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 TNRC6AQ8NDV7 1962 aaKnown RBP14.38□□□□□ -0.11
TSPAN4-213ENST00000524895 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 ELOA3DA6NLF2 546 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 FAM166BA8MTA8 275 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 TRAPPC6AO75865 159 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 THY1P04216 161 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 RFPL3SP0C7P2 107 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 PNMTP11086 282 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 TACR3P29371 465 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 DNAJA1P31689 397 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 EIF1P41567 113 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 POLR2HP52434 150 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 ARHGDIAP52565 204 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 IST1P53990 364 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 SLC34A1Q06495 639 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 MERTKQ12866 999 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 PPP1R8Q12972 351 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 GK3PQ14409 553 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 EXOC3L2Q2M3D2 409 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 ELOA3BQ3SY89 546 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 FBXW10Q5XX13 1052 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 POMZP3Q6PJE2 187 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 SLC22A16Q86VW1 577 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 RBMXL3Q8N7X1 1067 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 ELOA3Q8NG57 546 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 SLC38A4Q969I6 547 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 ZNF524Q96C55 264 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 SDCCAG3Q96C92 435 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 MPP4Q96JB8 637 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 MRGPRX4Q96LA9 322 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 ALPK1Q96QP1 1244 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 UBQLN3Q9H347 655 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 C12orf10Q9HB07 376 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 NTN4Q9HB63 628 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 ZNF71Q9NQZ8 489 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 MAN2C1Q9NTJ4 1040 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 B3GNT3Q9Y2A9 372 aa14.37□□□□□ -0.11
TSPAN4-213ENST00000524895 EML6Q6ZMW3 1958 aa14.36□□□□□ -0.11
TSPAN4-213ENST00000524895 TRBV4-1A0A0J9YWV2 114 aa14.36□□□□□ -0.11
TSPAN4-213ENST00000524895 SAC3D1A6NKF1 404 aa14.36□□□□□ -0.11
TSPAN4-213ENST00000524895 GLSO94925 669 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-213ENST00000524895 LYPD3O95274 346 aa14.36□□□□□ -0.11
TSPAN4-213ENST00000524895 ZNF23P17027 643 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms