RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 SERHL2Q9H4I8 314 aa11.22□□□□□ -0.61
TOP1MT-217ENST00000523417 ESRP2Q9H6T0 727 aaKnown RBP11.22□□□□□ -0.61
TOP1MT-217ENST00000523417 SERINC1Q9NRX5 453 aa11.22□□□□□ -0.61
TOP1MT-217ENST00000523417 ACER3Q9NUN7 267 aa11.22□□□□□ -0.61
TOP1MT-217ENST00000523417 EXD2Q9NVH0 621 aa11.22□□□□□ -0.61
TOP1MT-217ENST00000523417 HAO1Q9UJM8 370 aa11.22□□□□□ -0.61
TOP1MT-217ENST00000523417 HIVEP2P31629 2446 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 IGKV3D-15A0A087WSY6 115 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 NPIPA5A0A0B4J1W7 369 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 TRIM64A6NGJ6 449 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 TRIM64BA6NI03 449 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 NPIPA7E9PJI5 369 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 ANKRD28O15084 1053 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 CFLARO15519 480 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 FESP07332 822 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 MYZAPP0CAP1 466 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 DHRS4L1P0CG22 281 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 NPIPA8P0DM63 369 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 PGCP20142 388 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 UQCRC2P22695 453 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 PGM1P36871 562 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 APOBEC1P41238 236 aaKnown RBP11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 SESN3P58005 492 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 RPS4XP62701 263 aaKnown RBP11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 RASGEF1BQ0VAM2 473 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 PGS1Q32NB8 556 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 ANXA8L1Q5VT79 327 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 OR4F3Q6IEY1 312 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 C3orf33Q6P1S2 294 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 EIF3MQ7L2H7 374 aaKnown RBP11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 MREGQ8N565 214 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 VPS37AQ8NEZ2 397 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 OR5D16Q8NGK9 328 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 RAB3IL1Q8TBN0 382 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 AGR3Q8TD06 166 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 SLC25A43Q8WUT9 341 aaPredicted RBP11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 PMM1Q92871 262 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 KISS1RQ969F8 398 aaPredicted RBP11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 TRIM44Q96DX7 344 aaPredicted RBP11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 THUMPD3Q9BV44 507 aaKnown RBP11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 AKTIPQ9H8T0 292 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 PCDHGB4Q9UN71 923 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 RNF115Q9Y4L5 304 aa11.21□□□□□ -0.61
TOP1MT-217ENST00000523417 USF3Q68DE3 2245 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 NUP214P35658 2090 aaPredicted RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 DPRXA6NFQ7 191 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 DNPH1O43598 174 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 ITM2AO43736 263 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 SKAP2O75563 359 aaPredicted RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 H6PDO95479 791 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 CSTAP01040 98 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 SERPINE1P05121 402 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 CD3EP07766 207 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 IL32P24001 234 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 SLC7A1P30825 629 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 RPL14P50914 215 aaKnown RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 ATP5J2P56134 94 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 ABCE1P61221 599 aaKnown RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 CSNK2A1P68400 391 aaPredicted RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 PHC1P78364 1004 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 TXNL4AP83876 142 aaKnown RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 CASP8Q14790 479 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 GPR68Q15743 365 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 NDUFAF6Q330K2 333 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 ZNF672Q499Z4 452 aaPredicted RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 TIMM23BQ5SRD1 257 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 C1QTNF12Q5T7M4 302 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 BHLHA15Q7RTS1 189 aaPredicted RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 GALNT5Q7Z7M9 940 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 CLECL1Q8IZS7 167 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 OR5AK3PQ8NH89 298 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 SMAP2Q8WU79 429 aaPredicted RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 TRMT61AQ96FX7 289 aaKnown RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 CCDC106Q9BWC9 280 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 POTEKPQ9BYX7 375 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 TRIM2Q9C040 744 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 EXOSC3Q9NQT5 275 aaKnown RBP11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 MKLN1Q9UL63 735 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 LAMP3Q9UQV4 416 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 SLC35A3Q9Y2D2 325 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 RAP2CQ9Y3L5 183 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 PRR14LQ5THK1 2151 aa11.2□□□□□ -0.62
TOP1MT-217ENST00000523417 A0A1W2PNR3 127 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 TM9SF1O15321 606 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 GPR37O15354 613 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 KIAA0513O60268 411 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 COX5AP20674 150 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 IDUAP35475 653 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 DIO1P49895 249 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 MAP2K6P52564 334 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 RPS26P62854 115 aaKnown RBP11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 MAPK14Q16539 360 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 DPY19L1Q2PZI1 675 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 TNFAIP8L3Q5GJ75 292 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 ATAD3BQ5T9A4 648 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 SAXO2Q658L1 398 aa11.19□□□□□ -0.62
TOP1MT-217ENST00000523417 TYW3Q6IPR3 259 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms