RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZG16BQ96DA0 208 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 NEURL3Q96EH8 262 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 OR5B2Q96R09 309 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 INPP5KQ9BT40 448 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 AIG1Q9NVV5 245 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 GPR52Q9Y2T5 361 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 PRAMEF27A3QJZ7 478 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 KIAA0513O60268 411 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 SMPD2O60906 423 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 AGR2O95994 175 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 PLAUP00749 431 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 FPR1P21462 350 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 RYKP34925 604 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 PGM1P36871 562 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 KHKP50053 298 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 MERTKQ12866 999 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 BEX5Q5H9J7 111 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 FRRS1Q6ZNA5 592 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 EIF3MQ7L2H7 374 aaKnown RBP18.42■□□□□ 0.54
SDCBP-209ENST00000522243 LSRQ86X29 649 aaPredicted RBP18.42■□□□□ 0.54
SDCBP-209ENST00000522243 RNF130Q86XS8 419 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 P3H2Q8IVL5 708 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 ZNF619Q8N2I2 560 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 PIGTQ969N2 578 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 PLPPR2Q96GM1 343 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 CCDC115Q96NT0 180 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 CCL19Q99731 98 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 C2CD3Q4AC94 2353 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 DSCAMO60469 2012 aa18.42■□□□□ 0.54
SDCBP-209ENST00000522243 FREM1Q5H8C1 2179 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 CLDN24A6NM45 220 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 ETV2O00321 342 aaPredicted RBP18.41■□□□□ 0.54
SDCBP-209ENST00000522243 DNAJA2O60884 412 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 GCM2O75603 506 aaPredicted RBP18.41■□□□□ 0.54
SDCBP-209ENST00000522243 YES1P07947 543 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 PGCP20142 388 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 PSMB1P20618 241 aaKnown RBP18.41■□□□□ 0.54
SDCBP-209ENST00000522243 EPHA3P29320 983 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 CDKN2CP42773 168 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 RAC3P60763 192 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 CHRNEQ04844 493 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 C3orf33Q6P1S2 294 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 PLEKHM3Q6ZWE6 761 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 SPATA19Q7Z5L4 167 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 ZNF563Q8TA94 476 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 TMEM234Q8WY98 164 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 ST8SIA1Q92185 356 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 ARL8AQ96BM9 186 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 S100PBPQ96BU1 408 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 ZNF775Q96BV0 537 aaPredicted RBP18.41■□□□□ 0.54
SDCBP-209ENST00000522243 DNAJA3Q96EY1 480 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 PANX1Q96RD7 426 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 SMR3AQ99954 134 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 SAP130Q9H0E3 1048 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 SERINC1Q9NRX5 453 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 THAP1Q9NVV9 213 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 BTNL2Q9UIR0 455 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 GPR45Q9Y5Y3 372 aa18.41■□□□□ 0.54
SDCBP-209ENST00000522243 CCDC154A6NI56 674 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 HMGN4O00479 90 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 SMAD9O15198 467 aaKnown RBP18.4■□□□□ 0.54
SDCBP-209ENST00000522243 GSNP06396 782 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 FOSL1P15407 271 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 SYPL1Q16563 259 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 Q5PR19 223 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 SHEQ5VZ18 495 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 ZNF704Q6ZNC4 412 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-209ENST00000522243 ZNF621Q6ZSS3 439 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.4■□□□□ 0.54
SDCBP-209ENST00000522243 GABRG1Q8N1C3 465 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 SLC43A2Q8N370 569 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 ANKFN1Q8N957 763 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 OR52E6Q96RD3 313 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 ZNF300Q96RE9 604 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-209ENST00000522243 PIP5K1AQ99755 562 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 PSD2Q9BQI7 771 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 POLE3Q9NRF9 147 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 ACER3Q9NUN7 267 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 ING1Q9UK53 422 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-209ENST00000522243 SLC35A3Q9Y2D2 325 aa18.4■□□□□ 0.54
SDCBP-209ENST00000522243 HDAC3O15379 428 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 ARHGEF9O43307 516 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 SNNO75324 88 aaPredicted RBP18.39■□□□□ 0.53
SDCBP-209ENST00000522243 ADAP00813 363 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 PGRP06401 933 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 TFPIP10646 304 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 DIO1P49895 249 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 MAGOHP61326 146 aaKnown RBP18.39■□□□□ 0.53
SDCBP-209ENST00000522243 KCNJ10P78508 379 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 HPCAP84074 193 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 RASGEF1BQ0VAM2 473 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 SFRP5Q5T4F7 317 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 NXNQ6DKJ4 435 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 FAM71CQ8NEG0 241 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 STEAP2Q8NFT2 490 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 PNPT1Q8TCS8 783 aaKnown RBP18.39■□□□□ 0.53
SDCBP-209ENST00000522243 PERPQ96FX8 193 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 OR10A4Q9H209 315 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 GP6Q9HCN6 339 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 CTPS2Q9NRF8 586 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms