RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 GABRA5P31644 462 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 LSSP48449 732 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 ERVK-25P63136 954 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 LRRC26Q2I0M4 334 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 PLK5Q496M5 336 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 C3orf38Q5JPI3 329 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 PLXDC1Q8IUK5 500 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 HOXB13Q92826 284 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 C19orf43Q9BQ61 176 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 SLC25A18Q9H1K4 315 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 POT1Q9NUX5 634 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 SPATA6Q9NWH7 488 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 DIMT1Q9UNQ2 313 aaKnown RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 A0A0J9YY10 115 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SGK494L7N484 410 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 B3GALT4O96024 378 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GIFP27352 417 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 XCR1P46094 333 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 CLDN2P57739 230 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GNMTQ14749 295 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 IRF4Q15306 451 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 OR1Q1Q15612 314 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GAREM2Q75VX8 874 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 COMMD7Q86VX2 200 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 TPRA1Q86W33 373 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 MSRB3Q8IXL7 192 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GALNT6Q8NCL4 622 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SLC7A13Q8TCU3 470 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 MR1Q95460 341 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SLIRPQ9GZT3 109 aaKnown RBP12.91□□□□□ -0.34
SYNPO-205ENST00000522122 A4GALTQ9NPC4 353 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 ABRACLQ9P1F3 81 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 V9GY05 133 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 MAP1BP46821 2468 aaKnown RBP12.91□□□□□ -0.34
SYNPO-205ENST00000522122 TRBV5-4A0A0C4DH59 114 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 DCDC2BA2VCK2 349 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SLCO2B1O94956 709 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GPR75O95800 540 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 CRYZL1O95825 349 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 AIFM1O95831 613 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 CAV3P56539 151 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GAB1Q13480 694 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 RTL10Q7L3V2 364 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 PTOV1Q86YD1 416 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 HHATLQ9HCP6 504 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SLC35A3Q9Y2D2 325 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GFRA2O00451 464 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 CPMP14384 443 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 ADH6P28332 368 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 NR0B1P51843 470 aaKnown RBP12.91□□□□□ -0.34
SYNPO-205ENST00000522122 PSPHP78330 225 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 PLP2Q04941 152 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 EXOSC7Q15024 291 aaKnown RBP12.91□□□□□ -0.34
SYNPO-205ENST00000522122 CYHR1Q6ZMK1 362 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 INSM2Q96T92 566 aaPredicted RBP12.91□□□□□ -0.34
SYNPO-205ENST00000522122 LPAR4Q99677 370 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SIP14410 1827 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 CRABP1P29762 137 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SLC6A8P48029 635 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SLC6A11P48066 632 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 HACD4Q5VWC8 232 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SLX4IPQ5VYV7 408 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 SSX6Q7RTT6 188 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 P4HA3Q7Z4N8 544 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 INIPQ9NRY2 104 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 MED17Q9NVC6 651 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 TXNL4BQ9NX01 149 aaKnown RBP12.91□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF226Q9NYT6 803 aa12.91□□□□□ -0.34
SYNPO-205ENST00000522122 GNRHRP30968 328 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 SLC1A3P43003 542 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 ARSKQ6UWY0 536 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 TMEM150AQ86TG1 271 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 OR52R1Q8NGF1 315 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 NEURL3Q96EH8 262 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF587Q96SQ5 575 aaPredicted RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 BTBD2Q9BX70 525 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 C8orf33Q9H7E9 229 aaPredicted RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 NAALAD2Q9Y3Q0 740 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF705EA8MWA4 302 aaPredicted RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 OR2T1O43869 369 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 UBL4AP11441 157 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 UQCRC1P31930 480 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 SLC6A19Q695T7 634 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 KIAA1211LQ6NV74 962 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 MTFR2Q6P444 385 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 DNAJC5GQ8N7S2 189 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 BRIX1Q8TDN6 353 aaKnown RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 FGF13Q92913 245 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 MS4A8Q9BY19 250 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 RNF167Q9H6Y7 350 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 HIF3AQ9Y2N7 669 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 A8MVJ9 347 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 C17orf105B2RV13 164 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 SYT7O43581 403 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 DPM1O60762 260 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 UGT2B7P16662 529 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 ELAVL4P26378 380 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms