RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 FUT8Q9BYC5 575 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 PIGUQ9H490 435 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 COQ10BQ9H8M1 238 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 DUSP22Q9NRW4 184 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 NPAP1Q9NZP6 1156 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 UPB1Q9UBR1 384 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 DCDC2Q9UHG0 476 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 FIS1Q9Y3D6 152 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 DTNAQ9Y4J8 743 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 ACTL7BQ9Y614 415 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 FREM1Q5H8C1 2179 aa10.14□□□□□ -0.79
MRPS28-206ENST00000520946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 A0A096LNT2 108 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 NDUFS8O00217 210 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 GPR171O14626 319 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 CFLARO15519 480 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 ZNF264O43296 627 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 EFNA2O43921 213 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 PGM3O95394 542 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 HMGN2P05204 90 aaKnown RBP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 UROSP10746 265 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 UBL4AP11441 157 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 IGFBP5P24593 272 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 APOBEC3AP31941 199 aaPredicted RBP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 HPCAL1P37235 193 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 MAP3K8P41279 467 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 ASMTP46597 345 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 ATP12AP54707 1039 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 TGFBR3Q03167 851 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 SPOCK1Q08629 439 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 MERTKQ12866 999 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 TOMM34Q15785 309 aaPredicted RBP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 NDUFAF6Q330K2 333 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 TIGD2Q4W5G0 525 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 KLHL26Q53HC5 615 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 C11orf71Q6IPW1 123 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 SEZ6L2Q6UXD5 910 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 C12orf54Q6X4T0 127 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 TIFABQ6ZNK6 161 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 SLC46A3Q7Z3Q1 461 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 HOXB13Q92826 284 aaPredicted RBP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 FBXO17Q96EF6 278 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 GIMAP5Q96F15 307 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 CCT7Q99832 543 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 VRK1Q99986 396 aaPredicted RBP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 KLHDC3Q9BQ90 382 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 ACTRT3Q9BYD9 372 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 GSTO2Q9H4Y5 243 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 EML4Q9HC35 981 aaKnown RBP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 TAS2R16Q9NYV7 291 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 BAIAP2L1Q9UHR4 511 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 ICAM5Q9UMF0 924 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 TRAF6Q9Y4K3 522 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 SPIN1Q9Y657 262 aaPredicted RBP10.13□□□□□ -0.79
MRPS28-206ENST00000520946 NBEAL1Q6ZS30 2694 aa10.13□□□□□ -0.79
MRPS28-206ENST00000520946 SMAD9O15198 467 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 TCF21O43680 179 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 EIF4E2O60573 245 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 PGRP06401 933 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 NEFHP12036 1026 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 COX5AP20674 150 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 RPL3P39023 403 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 MAGEA8P43361 318 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 CCT3P49368 545 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 DIO1P49895 249 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 SNRPD2P62316 118 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 RPL38P63173 70 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 LSM12Q3MHD2 195 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 GALNTL6Q49A17 601 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 SYT10Q6XYQ8 523 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 TMPPEQ6ZT21 453 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 MTDHQ86UE4 582 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 ZNF540Q8NDQ6 660 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 OR56A1Q8NGH5 318 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 ZNF563Q8TA94 476 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 PIGXQ8TBF5 258 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 ACMSDQ8TDX5 336 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 FAM120BQ96EK7 910 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 THUMPD3Q9BV44 507 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 QRSL1Q9H0R6 528 aaKnown RBP10.12□□□□□ -0.79
MRPS28-206ENST00000520946 GRPEL1Q9HAV7 217 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 SLC25A15Q9Y619 301 aa10.12□□□□□ -0.79
MRPS28-206ENST00000520946 TMEM114B3SHH9 223 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 OIP5O43482 229 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 LY6HO94772 140 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 WNT11O96014 354 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ERCC1P07992 297 aaPredicted RBP10.11□□□□□ -0.79
MRPS28-206ENST00000520946 PGCP20142 388 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 NR4A2P43354 598 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 PHC1P78364 1004 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 GPR68Q15743 365 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ZNF385BQ569K4 471 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 C9orf135Q5VTT2 229 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 CLEC6AQ6EIG7 209 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 BHLHB9Q6PI77 547 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 CASP12Q6UXS9 341 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ZYG11AQ6WRX3 759 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 FRMD7Q6ZUT3 714 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms