RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 PGM1P36871 562 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 IDH2P48735 452 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 POU4F3Q15319 338 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 CTU2Q2VPK5 515 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 FBXL19-AS1Q494R0 122 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 LIN52Q52LA3 116 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 MRPL2Q5T653 305 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 BLOC1S3Q6QNY0 202 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 CDH24Q86UP0 819 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 OR52P1PQ8NH57 321 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 CNOT9Q92600 299 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 STARD4Q96DR4 205 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 TMEM19Q96HH6 336 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 SLC39A3Q9BRY0 314 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 POLDIP3Q9BY77 421 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 SRXN1Q9BYN0 137 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
VEGFA-221ENST00000520265 MTHFD2LQ9H903 347 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 DNAJB12Q9NXW2 375 aaKnown RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 SPIN1Q9Y657 262 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-221ENST00000520265 AGAP5A6NIR3 686 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 EVPLLA8MZ36 301 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 CASKO14936 926 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ANGPT2O15123 496 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ADAMDEC1O15204 470 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 CAPN3P20807 821 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 KIR2DL2P43627 348 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ATP4BP51164 291 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ZNF239Q16600 458 aaKnown RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 TMEM201Q5SNT2 666 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 GCNT6Q5T4J0 391 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 PLEKHM3Q6ZWE6 761 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 FAM214BQ7L5A3 538 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 VRK2Q86Y07 508 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 FUNDC1Q8IVP5 155 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 CADM2Q8N3J6 435 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ACBD4Q8NC06 268 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 FAM222BQ8WU58 562 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ABHD3Q8WU67 409 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 SLC38A5Q8WUX1 472 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 OIT3Q8WWZ8 545 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 MAL2Q969L2 176 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 GMPPAQ96IJ6 420 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ADGRG7Q96K78 797 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 TMEM120AQ9BXJ8 343 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 CTPS2Q9NRF8 586 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 FGFR1OP2Q9NVK5 253 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 THUMPD1Q9NXG2 353 aaKnown RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 NDRG3Q9UGV2 375 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ZNF232Q9UNY5 417 aa12.69□□□□□ -0.38
VEGFA-221ENST00000520265 ZNF443Q9Y2A4 671 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-221ENST00000520265 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 CFAP73A6NFT4 308 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 A8MXE2 369 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 AP3D1O14617 1153 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 EFNA2O43921 213 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 NUDT7P0C024 238 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 NID1P14543 1247 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 MAGEA8P43361 318 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 COPZ1P61923 177 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 SORDQ00796 357 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 GUCY1A3Q02108 690 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 FAM27E3Q08E93 113 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 RGNQ15493 299 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 PAGE3Q5JUK9 113 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 ALKBH2Q6NS38 261 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 ZNF836Q6ZNA1 936 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 FCRLAQ7L513 359 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 CMIPQ8IY22 773 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 ZNF610Q8N9Z0 462 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 OR6K3Q8NGY3 331 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 NFKBIDQ8NI38 313 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 ZNF524Q96C55 264 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 SIKE1Q9BRV8 207 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 MED18Q9BUE0 208 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 CLEC4MQ9H2X3 399 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-221ENST00000520265 ARMC7Q9H6L4 198 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 RLIMQ9NVW2 624 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 KLHL28Q9NXS3 571 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 JKAMPQ9P055 326 aa12.68□□□□□ -0.38
VEGFA-221ENST00000520265 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-221ENST00000520265 ITPR2Q14571 2701 aa12.67□□□□□ -0.38
VEGFA-221ENST00000520265 A6NNC1 897 aa12.67□□□□□ -0.38
VEGFA-221ENST00000520265 ENO4A6NNW6 628 aa12.67□□□□□ -0.38
VEGFA-221ENST00000520265 SULT2B1O00204 365 aa12.67□□□□□ -0.38
VEGFA-221ENST00000520265 SS18L1O75177 396 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-221ENST00000520265 GUSBP08236 651 aa12.67□□□□□ -0.38
VEGFA-221ENST00000520265 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
VEGFA-221ENST00000520265 ENPP1P22413 925 aa12.67□□□□□ -0.38
VEGFA-221ENST00000520265 PPIBP23284 216 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms