RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SLC7A1P30825 629 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 EIF1P41567 113 aaKnown RBP16.13■□□□□ 0.17
SDC2-205ENST00000520233 HTR3AP46098 478 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 TMEM44Q2T9K0 475 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 FAM180AQ6UWF9 173 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 PLEKHM3Q6ZWE6 761 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 GRINAQ7Z429 371 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 YRDCQ86U90 279 aaKnown RBP16.13■□□□□ 0.17
SDC2-205ENST00000520233 CYP4Z1Q86W10 505 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 OR14L1PQ8NHC6 308 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 POC1BQ8TC44 478 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 ADAMTS16Q8TE57 1224 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 SLCO4A1Q96BD0 722 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 CHID1Q9BWS9 393 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 ADAM19Q9H013 955 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 ACAD8Q9UKU7 415 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 A4GNTQ9UNA3 340 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 MAP1BP46821 2468 aaKnown RBP16.13■□□□□ 0.17
SDC2-205ENST00000520233 A0A0B4J2E0 115 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 A0A1B0GWA3 101 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 A0A1B0GX12 115 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 TRAPPC13A5PLN9 417 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 OR5F1O95221 314 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 CELA3AP09093 270 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 THRBP10828 461 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 ZNF17P17021 662 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 IFNA8P32881 189 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 APOBEC1P41238 236 aaKnown RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 YAP1P46937 504 aaKnown RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 TAS2R41P59536 307 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 FOXF1Q12946 379 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 PIN1Q13526 163 aaPredicted RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 CMPK2Q5EBM0 449 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 WIPI1Q5MNZ9 446 aaPredicted RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 ULK3Q6PHR2 472 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 TSPYL5Q86VY4 417 aaPredicted RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 SIAH3Q8IW03 269 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 GTPBP8Q8N3Z3 284 aaPredicted RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 DNAJA4Q8WW22 397 aaPredicted RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 C3orf49Q96BT1 292 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 ZNF347Q96SE7 839 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 NPAS1Q99742 590 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 PIGQQ9BRB3 760 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 YY1AP1Q9H869 796 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 C12orf10Q9HB07 376 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 CTPS2Q9NRF8 586 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 ARMC1Q9NVT9 282 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 RPH3AQ9Y2J0 694 aaPredicted RBP16.12■□□□□ 0.17
SDC2-205ENST00000520233 AP4S1Q9Y587 144 aa16.12■□□□□ 0.17
SDC2-205ENST00000520233 J3KTA2 159 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 FFAR1O14842 300 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 FKBP6O75344 327 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 ENTPD5O75356 428 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 IGHG3P01860 377 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 TACR3P29371 465 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 POLR2HP52434 150 aaKnown RBP16.11■□□□□ 0.17
SDC2-205ENST00000520233 MERTKQ12866 999 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 COLEC12Q5KU26 742 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 SWT1Q5T5J6 900 aaKnown RBP16.11■□□□□ 0.17
SDC2-205ENST00000520233 RAET1LQ5VY80 246 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 ZFP1Q6P2D0 407 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 CISD2Q8N5K1 135 aaKnown RBP16.11■□□□□ 0.17
SDC2-205ENST00000520233 SLC41A3Q96GZ6 507 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 PIP5K1AQ99755 562 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 DEFB127Q9H1M4 99 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 SELENONQ9NZV5 590 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 RIMS3Q9UJD0 308 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 MGAQ8IWI9 3026 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 CACNA1GO43497 2377 aa16.11■□□□□ 0.17
SDC2-205ENST00000520233 LAMA5O15230 3695 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 CNTRLQ7Z7A1 2325 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 LINC01387J3KSC0 135 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 CHP2O43745 196 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 HCN1O60741 890 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 DIRAS1O95057 198 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 PRSS23O95084 383 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 LYPD3O95274 346 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 WISP1O95388 367 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 MT-ND1P03886 318 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 THY1P04216 161 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 TCEA1P23193 301 aaKnown RBP16.1■□□□□ 0.17
SDC2-205ENST00000520233 ELK4P28324 431 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 CDH12P55289 794 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 GFRA1P56159 465 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 B3GALT5-AS1P59052 145 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 FOXK1P85037 733 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 ST3GAL3Q11203 375 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 ALG10BQ5I7T1 473 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 ZNF324BQ6AW86 544 aaPredicted RBP16.1■□□□□ 0.17
SDC2-205ENST00000520233 GDF7Q7Z4P5 450 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 ZNF605Q86T29 641 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 ATG4DQ86TL0 474 aaPredicted RBP16.1■□□□□ 0.17
SDC2-205ENST00000520233 OFCC1Q8IZS5 231 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 PIK3C3Q8NEB9 887 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 FAR1Q8WVX9 515 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 PYDC1Q8WXC3 89 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 SLC38A4Q969I6 547 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 FNDC11Q9BVV2 318 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 SLC6A15Q9H2J7 730 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 OSGIN1Q9UJX0 560 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms