RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TMBIM1Q969X1 311 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 CPNE4Q96A23 557 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 C1GALT1C1Q96EU7 318 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ADGRG7Q96K78 797 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 HRASLS5Q96KN8 279 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ADOQ96SZ5 270 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 BPESC1Q9GZL8 116 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 OR51B5Q9H339 312 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 CENPHQ9H3R5 247 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 DSN1Q9H410 356 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ZMAT3Q9HA38 289 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 FOLH1BQ9HBA9 442 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 POPDC3Q9HBV1 291 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 MYNNQ9NPC7 610 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PPP1R14DQ9NXH3 145 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 EHD3Q9NZN3 535 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF639Q9UID6 485 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF180Q9UJW8 692 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 MRTO4Q9UKD2 239 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PSME2Q9UL46 239 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 CLEC4AQ9UMR7 237 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 USP22Q9UPT9 525 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GPR55Q9Y2T6 319 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PLLPQ9Y342 182 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GRIP1Q9Y3R0 1128 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 SPEF1Q9Y4P9 236 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 A0A087WUV0 522 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 IGLV3-32A0A0A0MS00 114 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ARPC4-TTLL3A0A0A6YYG9 625 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TCRBV7S3A2A0A539 114 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 C1orf226A1L170 272 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 C7orf72A4D263 438 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 GMNCA6NCL1 334 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 NPEPPSL1A6NEC2 478 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 NCF1BA6NI72 391 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 GLOD5A6NK44 160 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 OR5H1A6NKK0 313 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 GJE1A6NN92 205 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 NCF1CA8MVU1 366 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 VSTM5A8MXK1 200 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 B2RBV5 119 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SAP18O00422 153 aaKnown RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 EBAG9O00559 213 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TP73O15350 636 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 PHGDHO43175 533 aaKnown RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 UGDHO60701 494 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 PDE5AO76074 875 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 PRKD3O94806 890 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SEMA3DO95025 777 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SHBGP04278 402 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 YES1P07947 543 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CT45A8P0DMV1 189 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CT45A9P0DMV2 189 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 HKR1P10072 659 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 NCF1P14598 390 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CSNK2A2P19784 350 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 COX5AP20674 150 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CD40P25942 277 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 GABRB3P28472 473 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 LSP1P33241 339 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 BSGP35613 385 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 MAGEA4P43358 317 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SLC6A8P48029 635 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CENPAP49450 140 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 KHKP50053 298 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 EMDP50402 254 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 RPS6KA3P51812 740 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ARL4CP56559 192 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ARPC4P59998 168 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CTAG1AP78358 180 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 PHC1P78364 1004 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 C17orf67Q0P5P2 114 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CDK5R2Q13319 367 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TSNQ15631 228 aaKnown RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TRIP13Q15645 432 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ZSWIM7Q19AV6 140 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TMEM44Q2T9K0 475 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ANKDD1AQ495B1 522 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ANKRD39Q53RE8 183 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CT45A2Q5DJT8 189 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TNFAIP8L3Q5GJ75 292 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SPANXN3Q5MJ09 141 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 LIPJQ5W064 366 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 HBMQ6B0K9 141 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 GRHL2Q6ISB3 625 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 MFSD12Q6NUT3 480 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 C11orf88Q6PI97 169 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 PAGE2Q7Z2X7 111 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ZBTB46Q86UZ6 589 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF619Q8N2I2 560 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 GTPBP8Q8N3Z3 284 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SPATA6LQ8N4H0 392 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TRIML2Q8N7C3 387 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 OR52R1Q8NGF1 315 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 OR2W6PQ8NHA6 318 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 OR2V1Q8NHB1 315 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 HUS1BQ8NHY5 278 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms