RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 OR5M10Q6IEU7 315 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 TGIF2LXQ8IUE1 241 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 UBE2J2Q8N2K1 259 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SNED1Q8TER0 1413 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SCFD1Q8WVM8 642 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 TCTEX1D2Q8WW35 142 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 MAIP1Q8WWC4 291 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC38A2Q96QD8 506 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 MTMR9Q96QG7 549 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 CYP2S1Q96SQ9 504 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 COPS8Q99627 209 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 CCDC77Q9BR77 488 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 RPAP1Q9BWH6 1393 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 RAB34Q9BZG1 259 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 VCPKMTQ9H867 229 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 METTL7AQ9H8H3 244 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 PAK1IP1Q9NWT1 392 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 ANGPTL2Q9UKU9 493 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 ERVW-1Q9UQF0 538 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 KIF26BQ2KJY2 2108 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 ANKRD30BQ9BXX2 1392 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 SULT2B1O00204 365 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 CDX4O14627 284 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 POLR2DO15514 142 aaKnown RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 CLDN9O95484 217 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 AP2A1O95782 977 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 NDUFB10O96000 172 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 CCDC130P13994 396 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 GDI1P31150 447 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 FGF9P31371 208 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 DUSP3P51452 185 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC25A1P53007 311 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 CRYBB1P53674 252 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 OC90Q02509 493 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 TGIF1Q15583 401 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 CFAP221Q4G0U5 840 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC22A9Q8IVM8 553 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 SVOPLQ8N434 492 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 AKR7LQ8NHP1 331 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 CCNL2Q96S94 520 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 CCT8L2Q96SF2 557 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 TSSK1BQ9BXA7 367 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 MIEF1Q9NQG6 463 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 WARS2Q9UGM6 360 aaKnown RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 PHF11Q9UIL8 331 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 PRPF19Q9UMS4 504 aaKnown RBP4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 PCNX3Q9H6A9 2034 aa4.07□□□□□ -1.76
HMGB1P46-201ENST00000520062 ATP10AO60312 1499 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 A0A087WWV3 80 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 FAM47DPA6NHR8 397 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 DHRS7CA6NNS2 312 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ZNF716A6NP11 495 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 SRRM5B3KS81 715 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 OR10H3O60404 316 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ZNF354AO60765 605 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 RAMP3O60896 148 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 GNA14O95837 355 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 LGALS2P05162 132 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ZNF735P0CB33 412 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC35E2P0CK97 266 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 CAPN2P17655 700 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 COX5AP20674 150 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 GCAP28676 217 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ADORA2BP29275 332 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 KIR2DS2P43631 304 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 DAP3P51398 398 aaKnown RBP4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 HSPA2P54652 639 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 CXCL6P80162 114 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ASAH1Q13510 395 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 CUL1Q13616 776 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 IMMTQ16891 758 aaKnown RBP4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 Q1RN00 199 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 TIMM50Q3ZCQ8 353 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 C6orf226Q5I0X4 101 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 NAXDQ8IW45 347 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 GPR65Q8IYL9 337 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 CADM2Q8N3J6 435 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 CATSPER1Q8NEC5 780 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 FAF2Q96CS3 445 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 C10orf35Q96D05 121 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 IL4I1Q96RQ9 567 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ATOH8Q96SQ7 321 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ROPN1BQ9BZX4 212 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 POPDC2Q9HBU9 364 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 FANCFQ9NPI8 374 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ETNK2Q9NVF9 386 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ONECUT1Q9UBC0 465 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 SUN2Q9UH99 717 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 ZNF639Q9UID6 485 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 PPIAL4AQ9Y536 164 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 CSAG2Q9Y5P2 127 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 NPTNQ9Y639 398 aa4.06□□□□□ -1.76
HMGB1P46-201ENST00000520062 POGZQ7Z3K3 1410 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CTAGE15A4D2H0 777 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 FRG2CA6NGY1 282 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 ZNF705EA8MWA4 302 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 TRDCB7Z8K6 153 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms