RNA–Protein interactions for RNA: ENST00000519342.1

RNF19A-204, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, human

TSL 4

Gene RNF19A, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF19A-204	ENST00000519342	CPNE4	Q96A23	557 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF19A-204	ENST00000519342	QRSL1	Q9H0R6	528 aa	Known RBP	13.9	□□□□□ -0.18
RNF19A-204	ENST00000519342	FANCF	Q9NPI8	374 aa		13.9	□□□□□ -0.18
RNF19A-204	ENST00000519342	KLHL28	Q9NXS3	571 aa		13.9	□□□□□ -0.18
RNF19A-204	ENST00000519342	CDHR4	A6H8M9	788 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	SHISA8	B8ZZ34	492 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	TOX	O94900	526 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	LSP1	P33241	339 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	SFTPD	P35247	375 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	IDH2	P48735	452 aa	Known RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	RNF144A	P50876	292 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	SUCLG1	P53597	346 aa	Known RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	CSNK2A1	P68400	391 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	SCARB2	Q14108	478 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	PON3	Q15166	354 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	NDUFAF6	Q330K2	333 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	PPP4R4	Q6NUP7	873 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	OLIG3	Q7RTU3	272 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	GGN	Q86UU5	652 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	MSRB3	Q8IXL7	192 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	C9orf106	Q8NAJ2	232 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	POC1B	Q8TC44	478 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	C10orf82	Q8WW14	230 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	OSTF1	Q92882	214 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	INTS12	Q96CB8	462 aa	Known RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	ELAC2	Q9BQ52	826 aa	Known RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	ECSIT	Q9BQ95	431 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	EMC9	Q9Y3B6	208 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	DOPEY1	Q5JWR5	2465 aa		13.89	□□□□□ -0.19
RNF19A-204	ENST00000519342	DIDO1	Q9BTC0	2240 aa	Known RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	LOC100653049	A0A140TA62	436 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	SYT5	O00445	386 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	TNFSF11	O14788	317 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	MRAS	O14807	208 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	OIP5	O43482	229 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	KRT34	O76011	436 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	NTN1	O95631	604 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	C1QC	P02747	245 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	PRKAR1B	P31321	381 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	SLC1A3	P43003	542 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	POLR2H	P52434	150 aa	Known RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	ZNF136	P52737	540 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	DLX5	P56178	289 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	RNPS1	Q15287	305 aa	Known RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	TOMM34	Q15785	309 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	PLEKHM3	Q6ZWE6	761 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	ARPIN	Q7Z6K5	226 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	SERPINA11	Q86U17	422 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	SLC43A2	Q8N370	569 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	OR8J3	Q8NGG0	315 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	NFKBID	Q8NI38	313 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	RASSF5	Q8WWW0	418 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	CNOT9	Q92600	299 aa	Known RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	MAL2	Q969L2	176 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	LRRC58	Q96CX6	371 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	DDIT4L	Q96D03	193 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	CMTM5	Q96DZ9	223 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	ZHX1-C8orf76	Q96EF9	292 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	TACO1	Q9BSH4	297 aa	Known RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	UCK2	Q9BZX2	261 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	TMEM185B	Q9H7F4	350 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	RNF122	Q9H9V4	155 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	DNAJB12	Q9NXW2	375 aa	Known RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	CHRNA9	Q9UGM1	479 aa		13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	USP9X	Q93008	2570 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	PHF3	Q92576	2039 aa	Known RBP	13.88	□□□□□ -0.19
RNF19A-204	ENST00000519342	DOPEY2	Q9Y3R5	2298 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	CENPVL1	A0A0U1RR11	272 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	NKX2-6	A6NCS4	301 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	NDUFAB1	O14561	156 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	EEF1E1	O43324	174 aa	Known RBP	13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	CXCL13	O43927	109 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	NUDT7	P0C024	238 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	CTBP2	P56545	445 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	RAC3	P60763	192 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	GNGT1	P63211	74 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	EPS8	Q12929	822 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	MAPK11	Q15759	364 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	FBXL19-AS1	Q494R0	122 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	WBP2NL	Q6ICG8	309 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	PATL1	Q86TB9	770 aa	Known RBP	13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	RETREG3	Q86VR2	466 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	SNX32	Q86XE0	403 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	VRK2	Q86Y07	508 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	ATP6V1C2	Q8NEY4	427 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	FNDC9	Q8TBE3	224 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	SLC26A7	Q8TE54	656 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	RNASE6	Q93091	150 aa	Known RBP	13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	MARVELD3	Q96A59	401 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	FAM107B	Q9H098	131 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	ENKD1	Q9H0I2	346 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	KAT8	Q9H7Z6	458 aa	Known RBP	13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	EFCAB1	Q9HAE3	211 aa		13.87	□□□□□ -0.19
RNF19A-204	ENST00000519342	GP6	Q9HCN6	339 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms