RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 FAM198BQ6UWH4 519 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 BIVMQ86UB2 503 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 SATL1Q86VE3 508 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 LGI4Q8N135 537 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 SLC25A41Q8N5S1 370 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 CCDC185Q8N715 623 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 OR52H1Q8NGJ2 320 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 OR8J1Q8NGP2 316 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 ELP5Q8TE02 316 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 SLCO2A1Q92959 643 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 FUBP1Q96AE4 644 aaKnown RBP6.63□□□□□ -1.35
CLK4-202ENST00000519132 PLEKHA8Q96JA3 519 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 C10orf90Q96M02 699 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 RILPQ96NA2 401 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 ZNF317Q96PQ6 595 aaPredicted RBP6.63□□□□□ -1.35
CLK4-202ENST00000519132 CCDC3Q9BQI4 270 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 ACTR6Q9GZN1 396 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 SMARCAL1Q9NZC9 954 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 MAT2BQ9NZL9 334 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 WASHC1A8K0Z3 465 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 MEI4A8MW99 385 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 WASH3PC4AMC7 463 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 HYAL3O43820 417 aaPredicted RBP6.63□□□□□ -1.35
CLK4-202ENST00000519132 FGF19O95750 216 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 PCCBP05166 539 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 HCKP08631 526 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 CTXN2P0C2S0 81 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 SMIM6P0DI80 62 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 FEN1P39748 380 aaKnown RBP6.63□□□□□ -1.35
CLK4-202ENST00000519132 CDH17Q12864 832 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 TFDP2Q14188 446 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 WASH2PQ6VEQ5 465 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 TMPRSS12Q86WS5 348 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 MISPQ8IVT2 679 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 LRRC17Q8N6Y2 441 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 PRELID2Q8N945 189 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 ALG14Q96F25 216 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 CDCA3Q99618 268 aaPredicted RBP6.63□□□□□ -1.35
CLK4-202ENST00000519132 LRRC1Q9BTT6 524 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 NKIRAS1Q9NYS0 192 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 PCYOX1Q9UHG3 505 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 SCML1Q9UN30 329 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 LAMP3Q9UQV4 416 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 NDUFAF1Q9Y375 327 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 AP4B1Q9Y6B7 739 aa6.63□□□□□ -1.35
CLK4-202ENST00000519132 NPEPPSL1A6NEC2 478 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 E5RI56 91 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 LRRTM2O43300 516 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 SCO1O75880 301 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 AGTP01019 485 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 LDLRP01130 860 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 IFNA6P05013 189 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 SLC2A1P11166 492 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 BMP5P22003 454 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CORO1AP31146 461 aaKnown RBP6.62□□□□□ -1.35
CLK4-202ENST00000519132 NUP107P57740 925 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 DEFA6Q01524 100 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 PUDPQ08623 228 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 NME3Q13232 169 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 GAMTQ14353 236 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 ITIH4Q14624 930 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 FASTKD1Q53R41 847 aaKnown RBP6.62□□□□□ -1.35
CLK4-202ENST00000519132 DDI2Q5TDH0 399 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CCDC137Q6PK04 289 aaKnown RBP6.62□□□□□ -1.35
CLK4-202ENST00000519132 MRGPREQ86SM8 312 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 TMEM150AQ86TG1 271 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 ZNF573Q86YE8 665 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 RNF157Q96PX1 679 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CMKLR1Q99788 373 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 RAB17Q9H0T7 212 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 RBM38Q9H0Z9 239 aaKnown RBP6.62□□□□□ -1.35
CLK4-202ENST00000519132 GPN1Q9HCN4 374 aaPredicted RBP6.62□□□□□ -1.35
CLK4-202ENST00000519132 FKBP7Q9Y680 259 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CHD9Q3L8U1 2897 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 TNRC18O15417 2968 aaPredicted RBP6.62□□□□□ -1.35
CLK4-202ENST00000519132 C2orf16Q68DN1 1984 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CHD5Q8TDI0 1954 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 OR2AT4A6NND4 320 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 A8MUI8 341 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 FAM25AB3EWG3 89 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 FAM25CB3EWG5 89 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 FAM25GB3EWG6 89 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 LOC110117498-PIK3R3F6TDL0 507 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 I6L893 689 aaPredicted RBP6.62□□□□□ -1.35
CLK4-202ENST00000519132 HSPA12AO43301 675 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CRHP06850 196 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CD48P09326 243 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 DANCRP0C864 163 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 NR1D1P20393 614 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 C21orf59P57076 290 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 UBE2G2P60604 165 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 PSME3P61289 254 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 NCALDP61601 193 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 HSF2Q03933 536 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 ZNF415Q09FC8 603 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 KRT81Q14533 505 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 ICAM4Q14773 271 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 PHLDA2Q53GA4 152 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 PPM1LQ5SGD2 360 aa6.62□□□□□ -1.35
CLK4-202ENST00000519132 CLEC6AQ6EIG7 209 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms