RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 IL7RP16871 459 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.57
CLCN3-210ENST00000515420 KIR2DL2P43627 348 aaPredicted RBP11.46□□□□□ -0.57
CLCN3-210ENST00000515420 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
CLCN3-210ENST00000515420 TLE4Q04727 773 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 MAPK11Q15759 364 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 AGKQ53H12 422 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 GTF2IRD2BQ6EKJ0 949 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 FAM214BQ7L5A3 538 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 GTF2IRD2Q86UP8 949 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 FAM222BQ8WU58 562 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 SLC38A5Q8WUX1 472 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 WDR60Q8WVS4 1066 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 STARD4Q96DR4 205 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 AURKBQ96GD4 344 aaPredicted RBP11.46□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF559Q9BR84 538 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 RBM24Q9BX46 236 aaKnown RBP11.46□□□□□ -0.57
CLCN3-210ENST00000515420 PRRG4Q9BZD6 226 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 CCDC134Q9H6E4 229 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 GP6Q9HCN6 339 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 A4GALTQ9NPC4 353 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 SERINC1Q9NRX5 453 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 ACER3Q9NUN7 267 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 DCTN4Q9UJW0 460 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 LRBAP50851 2863 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 UQCRHLA0A096LP55 91 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 TRBV5-3A0A0A0MS03 114 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 A0A0G2JND7 137 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 A0A0G2JPF8 293 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 A8MXE2 369 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 HNRNPCL2B2RXH8 293 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 HNRNPCL3B7ZW38 293 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 CXCL13O43927 109 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 HNRNPCL1O60812 293 aaKnown RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 SS18L1O75177 396 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 CYP7B1O75881 506 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 CGAP01215 116 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 BCHEP06276 602 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 THBS1P07996 1170 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 HNRNPCL4P0DMR1 293 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 UQCRBP14927 111 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 NCF2P19878 526 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 IL11P20809 199 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 SFTPDP35247 375 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 KIR2DL3P43628 341 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 HTR3AP46098 478 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 CPA2P48052 419 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 MAP2K6P52564 334 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 AGFG1P52594 562 aaKnown RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 CARD18P57730 90 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 SESN3P58005 492 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 PLAURQ03405 335 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 MYBPHQ13203 477 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF239Q16600 458 aaKnown RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 LIN52Q52LA3 116 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 DPP10Q8N608 796 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 OR6K3Q8NGY3 331 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 RNF128Q8TEB7 428 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 OSTF1Q92882 214 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF524Q96C55 264 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 REXO5Q96IC2 774 aaKnown RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 LURAP1Q96LR2 239 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 CCDC106Q9BWC9 280 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 QRSL1Q9H0R6 528 aaKnown RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 ARMC7Q9H6L4 198 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 TMEM185BQ9H7F4 350 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 COQ10BQ9H8M1 238 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 BCL2L10Q9HD36 194 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 DNAJB12Q9NXW2 375 aaKnown RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 GALNT8Q9NY28 637 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 SLC25A37Q9NYZ2 338 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 EMC9Q9Y3B6 208 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 SPIN1Q9Y657 262 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-210ENST00000515420 MPDZO75970 2070 aa11.45□□□□□ -0.58
CLCN3-210ENST00000515420 CDHR4A6H8M9 788 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 TUBAL3A6NHL2 446 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 BCAS1O75363 584 aaPredicted RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 PLGP00747 810 aaPredicted RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 ETS2P15036 469 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 GPX2P18283 190 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 SHC1P29353 583 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 SLC7A1P30825 629 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 CLK1P49759 484 aaKnown RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 RAC3P60763 192 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 MERTKQ12866 999 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 LARS2Q15031 903 aaKnown RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 RNPS1Q15287 305 aaKnown RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 TMEM176BQ3YBM2 270 aaPredicted RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 PAGE3Q5JUK9 113 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 MRPL2Q5T653 305 aaKnown RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 RNF220Q5VTB9 566 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 VWA1Q6PCB0 445 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 PLEKHM3Q6ZWE6 761 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 GRINAQ7Z429 371 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 BTLAQ7Z6A9 289 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 LUZP2Q86TE4 346 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 MSRB3Q8IXL7 192 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 SLC43A2Q8N370 569 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 CNEP1R1Q8N9A8 125 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms