RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GOLGA8OA6NCC3 632 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 GOLGA8NF8WBI6 632 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 SLCO1B7G3V0H7 640 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 SMAD9O15198 467 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 BCAS1O75363 584 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ERLIN1O75477 346 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 GCM2O75603 506 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PRKD3O94806 890 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 C1QCP02747 245 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PGRP06401 933 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 UBTFL6P0CB48 400 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PGCP20142 388 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 SLC7A1P30825 629 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 HOXC12P31275 282 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 CHI3L1P36222 383 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 CDKN2CP42773 168 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 RAC3P60763 192 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 MAGOHP61326 146 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 TXNL4AP83876 142 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 HPCAP84074 193 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 TIGD2Q4W5G0 525 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 TMEM201Q5SNT2 666 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 BEND6Q5SZJ8 279 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ATG16L1Q676U5 607 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ANKRD34AQ69YU3 496 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PLEKHM3Q6ZWE6 761 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 NUFIP2Q7Z417 695 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 MAVSQ7Z434 540 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 RNF130Q86XS8 419 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 TUSC5Q8IXB3 177 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 GABRG1Q8N1C3 465 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ZNF619Q8N2I2 560 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 SLC43A2Q8N370 569 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 TRIML2Q8N7C3 387 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 GLB1L3Q8NCI6 653 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ATP6V1C2Q8NEY4 427 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 SLC25A43Q8WUT9 341 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PANX1Q96RD7 426 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PIP5K1AQ99755 562 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PSD2Q9BQI7 771 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 TACO1Q9BSH4 297 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ACTR6Q9GZN1 396 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 QRSL1Q9H0R6 528 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 WDR55Q9H6Y2 383 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 BCO1Q9HAY6 547 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 TMBIM4Q9HC24 238 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 EXOSC3Q9NQT5 275 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ACER3Q9NUN7 267 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 ING1Q9UK53 422 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 GPR52Q9Y2T5 361 aa9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 PRRC2AP48634 2157 aaKnown RBP9.31□□□□□ -0.92
HMGXB3-205ENST00000514469 IGHV3-15A0A0B4J1V0 119 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 CCDC154A6NI56 674 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 KLF11O14901 512 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 KLF4O43474 513 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 CYTIPO60759 359 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 CYP7B1O75881 506 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 YES1P07947 543 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 CHRM4P08173 479 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 KITP10721 976 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 IDO1P14902 403 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 RPS4Y1P22090 263 aaKnown RBP9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 ENPP1P22413 925 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 SESN3P58005 492 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 CHRNEQ04844 493 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 MERTKQ12866 999 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 SYPL1Q16563 259 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 ACKR1Q16570 336 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 SLC9B1Q4ZJI4 515 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 PDCD4Q53EL6 469 aaKnown RBP9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 SYT14P1Q58G82 188 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 BEX5Q5H9J7 111 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 ABLIM2Q6H8Q1 611 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 C20orf204Q6ZNR8 217 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 LRRC75A-AS1Q8N1F1 130 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 TMEM234Q8WY98 164 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 ARL8AQ96BM9 186 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 ZG16BQ96DA0 208 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 TRNT1Q96Q11 434 aaKnown RBP9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 OR5B2Q96R09 309 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 OR52E6Q96RD3 313 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 ZBTB18Q99592 522 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 INPP5KQ9BT40 448 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 CCDC106Q9BWC9 280 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 SLC38A1Q9H2H9 487 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 MANSC1Q9H8J5 431 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 UBTD1Q9HAC8 227 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 NKIRAS1Q9NYS0 192 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 KLHL9Q9P2J3 617 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 LIPT1Q9Y234 373 aa9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 RAI1Q7Z5J4 1906 aaPredicted RBP9.3□□□□□ -0.92
HMGXB3-205ENST00000514469 FLNAP21333 2647 aaKnown RBP9.29□□□□□ -0.92
HMGXB3-205ENST00000514469 CLDN24A6NM45 220 aa9.29□□□□□ -0.92
HMGXB3-205ENST00000514469 ADAM11O75078 769 aa9.29□□□□□ -0.92
HMGXB3-205ENST00000514469 FESP07332 822 aa9.29□□□□□ -0.92
HMGXB3-205ENST00000514469 FOSL1P15407 271 aa9.29□□□□□ -0.92
HMGXB3-205ENST00000514469 FPR1P21462 350 aa9.29□□□□□ -0.92
HMGXB3-205ENST00000514469 APOBEC1P41238 236 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms