RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 JMJD8Q96S16 334 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 SLC17A5Q9NRA2 495 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 CA10Q9NS85 328 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 HIF1ANQ9NWT6 349 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 ICAM5Q9UMF0 924 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 CARD8Q9Y2G2 431 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 AMDHD2Q9Y303 409 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 SPEF1Q9Y4P9 236 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 PCDHB14Q9Y5E9 798 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 ACTL7BQ9Y614 415 aa9.14□□□□□ -0.95
CLDND1-227ENST00000513452 IGKV3D-15A0A087WSY6 115 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 ULK1O75385 1050 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 ERCC1P07992 297 aaPredicted RBP9.13□□□□□ -0.95
CLDND1-227ENST00000513452 RBP1P09455 135 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 IFNGR1P15260 489 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 NTF4P34130 210 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 GPC1P35052 558 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 GSTM5P46439 218 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 DIO1P49895 249 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 SERPINB8P50452 374 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 P2RX1P51575 399 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 CCR4P51679 360 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 MRPS25P82663 173 aaKnown RBP9.13□□□□□ -0.95
CLDND1-227ENST00000513452 UAP1Q16222 522 aaPredicted RBP9.13□□□□□ -0.95
CLDND1-227ENST00000513452 HIST2H2BDQ6DRA6 164 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 FAM71E1Q6IPT2 247 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 GALNT18Q6P9A2 607 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 VHLLQ6RSH7 139 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 KLHL24Q6TFL4 600 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 IKBIPQ70UQ0 350 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 C17orf78Q8N4C9 275 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 TMCO5AQ8N6Q1 288 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 RFWD2Q8NHY2 731 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 GPR119Q8TDV5 335 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 JADE3Q92613 823 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 HOXB13Q92826 284 aaPredicted RBP9.13□□□□□ -0.95
CLDND1-227ENST00000513452 MRPL24Q96A35 216 aaKnown RBP9.13□□□□□ -0.95
CLDND1-227ENST00000513452 TMEM186Q96B77 213 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 ZNF524Q96C55 264 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 MS4A4EQ96PG1 132 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 KCNS3Q9BQ31 491 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 QRSL1Q9H0R6 528 aaKnown RBP9.13□□□□□ -0.95
CLDND1-227ENST00000513452 DPH5Q9H2P9 285 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 PLK3Q9H4B4 646 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 NARFLQ9H6Q4 476 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 GIN1Q9NXP7 522 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 TAS2R7Q9NYW3 318 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 GRIP1Q9Y3R0 1128 aa9.13□□□□□ -0.95
CLDND1-227ENST00000513452 ZNF716A6NP11 495 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 LYNX1G3V0Z9 82 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 PDLIM1O00151 329 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 MRPL33O75394 65 aaKnown RBP9.12□□□□□ -0.95
CLDND1-227ENST00000513452 IFI6P09912 130 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 LYNX1P0DP58 116 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 DDX5P17844 614 aaKnown RBP9.12□□□□□ -0.95
CLDND1-227ENST00000513452 HMOX2P30519 316 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 LCN1P31025 176 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 SERPINB4P48594 390 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 PRPS1P60891 318 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 CALCOCO2Q13137 446 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 RIN1Q13671 783 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 RASA2Q15283 850 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 EFNB3Q15768 340 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 SPDYAQ5MJ70 313 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 LRIG3Q6UXM1 1119 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 CASP12Q6UXS9 341 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 GPRIN3Q6ZVF9 776 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 MTERF4Q7Z6M4 381 aaKnown RBP9.12□□□□□ -0.95
CLDND1-227ENST00000513452 ZCCHC24Q8N2G6 241 aaKnown RBP9.12□□□□□ -0.95
CLDND1-227ENST00000513452 ZNF786Q8N393 782 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 ZNF614Q8N883 585 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 ZNF527Q8NB42 609 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 C1orf162Q8NEQ5 155 aaPredicted RBP9.12□□□□□ -0.95
CLDND1-227ENST00000513452 NUP43Q8NFH3 380 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 CEP70Q8NHQ1 597 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 METTL6Q8TCB7 284 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 WDR60Q8WVS4 1066 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 NEU4Q8WWR8 484 aaPredicted RBP9.12□□□□□ -0.95
CLDND1-227ENST00000513452 DNAJA3Q96EY1 480 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 CHMP6Q96FZ7 201 aa9.12□□□□□ -0.95
CLDND1-227ENST00000513452 TRRAPQ9Y4A5 3859 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 IGHV1-18A0A0C4DH31 117 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 A8MT66 165 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 H3BNH8 94 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 hCG_2039718K7EN88 272 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 GTPBP1O00178 669 aaKnown RBP9.11□□□□□ -0.95
CLDND1-227ENST00000513452 SULT2B1O00204 365 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 GPR171O14626 319 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 KLF11O14901 512 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 PDPK1O15530 556 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 PDE5AO76074 875 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 WNT11O96014 354 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 MSMBP08118 114 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 ALOX5P09917 674 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 ATP6V1C1P21283 382 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 HSD17B3P37058 310 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 SLC1A3P43003 542 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 CSNK2A1P68400 391 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-227ENST00000513452 POU6F2P78424 691 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms