RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 VSX2P58304 361 aaPredicted RBP8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 HEPHL1Q6MZM0 1159 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 BMP8AQ7Z5Y6 402 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 ZAR1Q86SH2 424 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 SERPINA12Q8IW75 414 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 PIAS4Q8N2W9 510 aaPredicted RBP8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 OR14C36Q8NHC7 312 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 PTCHD1Q96NR3 888 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 SPRTNQ9H040 489 aaPredicted RBP8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 SLC6A17Q9H1V8 727 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 ERVMER34-1Q9H9K5 563 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 MEPEQ9NQ76 525 aaPredicted RBP8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 CMC2Q9NRP2 79 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 EVA1BQ9NVM1 165 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 FLVCR2Q9UPI3 526 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 USP34Q70CQ2 3546 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 RIIAD1A6NNX1 92 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 RCBTB2O95199 551 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 TIMP1P01033 207 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 NDUFS1P28331 727 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 PSMB10P40306 273 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 PER3P56645 1201 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 EEF1A1P68104 462 aaKnown RBP8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 ARHGEF6Q15052 776 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 ST3GAL2Q16842 350 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 COX18Q8N8Q8 333 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 MFSD9Q8NBP5 474 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 OR4K13Q8NH42 304 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 OMA1Q96E52 524 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 CCDC120Q96HB5 630 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 AUNIPQ9H7T9 357 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 SIGLEC7Q9Y286 467 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 SLC35A3Q9Y2D2 325 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 MED31Q9Y3C7 131 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 CACNA1IQ9P0X4 2223 aa8.57□□□□□ -1.04
LIMCH1-215ENST00000512632 I3L521 148 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 SERPINI2O75830 405 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 HPXP02790 462 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNF250P15622 560 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 BDH1Q02338 343 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 SUZ12Q15022 739 aaKnown RBP8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ANGPT1Q15389 498 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 KCTD12Q96CX2 325 aaKnown RBP8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 PAWRQ96IZ0 340 aaKnown RBP8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 PDCD1LG2Q9BQ51 273 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 CHIAQ9BZP6 476 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ADGRL4Q9HBW9 690 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 EIF3KQ9UBQ5 218 aaKnown RBP8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 DPP7Q9UHL4 492 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 U3KQ87 197 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 A0A1W2PQU0 124 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 C7orf66A4D0T2 115 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 LRRN3E7EW58 273 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ADRB1P08588 477 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 DNASE1P24855 282 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ARHGAP11BQ3KRB8 267 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNF425Q6IV72 752 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 GET4Q7L5D6 327 aaPredicted RBP8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 PRSS41Q7RTY9 318 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 SDR9C7Q8NEX9 313 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 OR52E2Q8NGJ4 325 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 HMGB4Q8WW32 186 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 CNOT9Q92600 299 aaKnown RBP8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 CLIP3Q96DZ5 547 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 PGLYRP3Q96LB9 341 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 LRRN3Q9H3W5 708 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 FGF22Q9HCT0 170 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 B3GNT2Q9NY97 397 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 STON1Q9Y6Q2 735 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 GXYLT2A0PJZ3 443 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 STX11O75558 287 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 KAT7O95251 611 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 WNT1P04628 370 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 H2AFB2P0C5Z0 115 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 GABRA3P34903 492 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 DUSP8Q13202 625 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 TOR2AQ5JU69 321 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 WDR45BQ5MNZ6 344 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 DCST2Q5T1A1 773 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 FAAH2Q6GMR7 532 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 FBXO42Q6P3S6 717 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ASPGQ86U10 573 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNF433Q8N7K0 673 aaPredicted RBP8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 OR10G6Q8NH81 332 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 CCL4L1Q8NHW4 92 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 GIMAP1Q8WWP7 306 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 THAP4Q8WY91 577 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 DERL3Q96Q80 235 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 FN3KQ9H479 309 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 NARFLQ9H6Q4 476 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 IL21RQ9HBE5 538 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 TBC1D29Q9UFV1 150 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 IMPA2O14732 288 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 P2RX6O15547 441 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 PTHLHP12272 177 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 PEPDP12955 493 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 GALP22466 123 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 HTRA3P83110 453 aa8.56□□□□□ -1.04
LIMCH1-215ENST00000512632 RGS1Q08116 209 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms