RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CYP20A1Q6UW02 462 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 C6orf89Q6UWU4 347 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 Q6ZT83 130 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 GPRIN3Q6ZVF9 776 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 MARCH3Q86UD3 253 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 C1QL4Q86Z23 238 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 ZNF781Q8N8C0 355 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 CDYL2Q8N8U2 506 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 OR52N5Q8NH56 324 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 WDR20Q8TBZ3 569 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 AGR3Q8TD06 166 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 DUSP19Q8WTR2 217 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 OSTF1Q92882 214 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 C1QTNF6Q9BXI9 259 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 LPAR2Q9HBW0 351 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 MYOZ1Q9NP98 299 aaPredicted RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 SLCO1B3Q9NPD5 702 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 HIF1ANQ9NWT6 349 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 MED29Q9NX70 200 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 VDAC3Q9Y277 283 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 SLC25A15Q9Y619 301 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 LOC105371242A0A075B767 164 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 H0YIV9 168 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 M0R1B8 84 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 ERAL1O75616 437 aaKnown RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 HSPA4LO95757 839 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PDYNP01213 254 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 ATP1B1P05026 303 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 FGF4P08620 206 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 VSIG8P0DPA2 414 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 ZNF17P17021 662 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 GGT1P19440 569 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PGCP20142 388 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 APOBEC3AP31941 199 aaPredicted RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 SERPINB5P36952 375 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 OR3A2P47893 321 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 NAA20P61599 178 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 CHRNEQ04844 493 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 GKAP1Q5VSY0 366 aaPredicted RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 KANK2Q63ZY3 851 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 ATG16L1Q676U5 607 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 CPLX4Q7Z7G2 160 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 GLCCI1Q86VQ1 547 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 MYLK4Q86YV6 388 aaPredicted RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 WDR75Q8IWA0 830 aaKnown RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 ZNF433Q8N7K0 673 aaPredicted RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 ZNF540Q8NDQ6 660 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 METTL6Q8TCB7 284 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 LRRC8CQ8TDW0 803 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 DYDC1Q8WWB3 177 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 UBE2E3Q969T4 207 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 VSTM2LQ96N03 204 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 JMJD8Q96S16 334 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 VRK1Q99986 396 aaPredicted RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 TUBB1Q9H4B7 451 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 CXorf36Q9H7Y0 433 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PTGES2Q9H7Z7 377 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 MYNNQ9NPC7 610 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 THAP1Q9NVV9 213 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PRODH2Q9UF12 536 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 HAO1Q9UJM8 370 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 FIS1Q9Y3D6 152 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 RAP2CQ9Y3L5 183 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 TRAF6Q9Y4K3 522 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 C9JVG2 144 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 ATP6V1G2-DDX39BF2Z307 99 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 MANBAO00462 879 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 ZNF195O14628 629 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 AZIN1O14977 448 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 JUNP05412 331 aaKnown RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 ENO1P06733 434 aaKnown RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 UROSP10746 265 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 BMP4P12644 408 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 PCMT1P22061 227 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 SERPINB1P30740 379 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 ARL1P40616 181 aaPredicted RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 PIK3CBP42338 1070 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 PHC1P78364 1004 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 SRSF4Q08170 494 aaKnown RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 SGO1Q5FBB7 561 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 SH2D4BQ5SQS7 431 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 SHQ1Q6PI26 577 aaKnown RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 APOOLQ6UXV4 268 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 PIGWQ7Z7B1 504 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 SLC44A2Q8IWA5 706 aaPredicted RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 LRRC34Q8IZ02 419 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 GTPBP8Q8N3Z3 284 aaPredicted RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 POC1BQ8TC44 478 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 FAM110BQ8TC76 370 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 TMEM186Q96B77 213 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 ZBTB8AQ96BR9 441 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 C3orf30Q96M34 536 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 SUCNR1Q9BXA5 334 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 NSRP1Q9H0G5 558 aaKnown RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 PAQR5Q9NXK6 330 aaPredicted RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 STK38LQ9Y2H1 464 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.96□□□□□ -1.14
NUP54-211ENST00000512151 TSC22D4Q9Y3Q8 395 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 CCL27Q9Y4X3 112 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms