RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 MRGPRX4Q96LA9 322 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 TRNT1Q96Q11 434 aaKnown RBP11.88□□□□□ -0.51
RNF4-215ENST00000511843 VIPAS39Q9H9C1 493 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 KLHL28Q9NXS3 571 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 PROCRQ9UNN8 238 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 CCDC168Q8NDH2 2452 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 ABCA4P78363 2273 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 UQCRHLA0A096LP55 91 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 DNAJA2O60884 412 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 KRT75O95678 551 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 BCHEP06276 602 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 NID1P14543 1247 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 POU2F1P14859 743 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 PGCP20142 388 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 ENPP1P22413 925 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 ADH6P28332 368 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 SLC7A1P30825 629 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 DNAJA1P31689 397 aaKnown RBP11.87□□□□□ -0.51
RNF4-215ENST00000511843 CD79BP40259 229 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 STX1BP61266 288 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 EEF1A1P68104 462 aaKnown RBP11.87□□□□□ -0.51
RNF4-215ENST00000511843 KCNJ10P78508 379 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 LRRC74AQ0VAA2 488 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 SELENBP1Q13228 472 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 SLC25A53Q5H9E4 307 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 PDSS1Q5T2R2 415 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 EEF1A1P5Q5VTE0 462 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 CDC20BQ86Y33 519 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 FUNDC1Q8IVP5 155 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 RNF128Q8TEB7 428 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 CKAP2Q8WWK9 683 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 GTF2H4Q92759 462 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 GMPPAQ96IJ6 420 aaPredicted RBP11.87□□□□□ -0.51
RNF4-215ENST00000511843 OR5B2Q96R09 309 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 PAIP1Q9H074 479 aaKnown RBP11.87□□□□□ -0.51
RNF4-215ENST00000511843 RMND5AQ9H871 391 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 TPT1P8Q9HAU6 139 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.87□□□□□ -0.51
RNF4-215ENST00000511843 PAQR5Q9NXK6 330 aaPredicted RBP11.87□□□□□ -0.51
RNF4-215ENST00000511843 CCDC167Q9P0B6 97 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 SLC35A3Q9Y2D2 325 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 EMC9Q9Y3B6 208 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 TESMINQ9Y4I5 508 aa11.87□□□□□ -0.51
RNF4-215ENST00000511843 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 AGAP5A6NIR3 686 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 ETV2O00321 342 aaPredicted RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 SS18L1O75177 396 aaPredicted RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 TGDSO95455 350 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 GUSBP08236 651 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 NUDT7P0C024 238 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 ZCCHC18P0CG32 403 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 CD8BP10966 210 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 CCNA2P20248 432 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 RPS4Y1P22090 263 aaKnown RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 AGTR1P30556 359 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 UGT2B10P36537 528 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 DSTNP60981 165 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 DAZAP2Q15038 168 aaPredicted RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 MRPL2Q5T653 305 aaKnown RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 C3orf33Q6P1S2 294 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 LRRC74BQ6ZQY2 392 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 C22orf34Q6ZV56 151 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 PLEKHM3Q6ZWE6 761 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 NUFIP2Q7Z417 695 aaKnown RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 VRK2Q86Y07 508 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 ARFGAP2Q8N6H7 521 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 OR6K3Q8NGY3 331 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 ZNF563Q8TA94 476 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 WDR60Q8WVS4 1066 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 ST8SIA1Q92185 356 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 ZC3HAV1LQ96H79 300 aaKnown RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 WFIKKN1Q96NZ8 548 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 CCDC28BQ9BUN5 200 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 KLHL4Q9C0H6 718 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 ACER3Q9NUN7 267 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 SLC25A37Q9NYZ2 338 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 C6orf203Q9P0P8 240 aaPredicted RBP11.86□□□□□ -0.51
RNF4-215ENST00000511843 SLAMF8Q9P0V8 285 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 LIPT1Q9Y234 373 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 PCDHB14Q9Y5E9 798 aa11.86□□□□□ -0.51
RNF4-215ENST00000511843 GJE1A6NN92 205 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 SIAH2O43255 324 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 TFPIP10646 304 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 IL7RP16871 459 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 HOXB9P17482 250 aaPredicted RBP11.85□□□□□ -0.51
RNF4-215ENST00000511843 IDH2P48735 452 aaKnown RBP11.85□□□□□ -0.51
RNF4-215ENST00000511843 ANXA11P50995 505 aaKnown RBP11.85□□□□□ -0.51
RNF4-215ENST00000511843 AGKQ53H12 422 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 PAGE3Q5JUK9 113 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 AP1ARQ63HQ0 302 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 MSANTD1Q6ZTZ1 278 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 FCRLAQ7L513 359 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 TUSC5Q8IXB3 177 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 MSRB3Q8IXL7 192 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 SLC38A5Q8WUX1 472 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 MAL2Q969L2 176 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 CPNE4Q96A23 557 aaPredicted RBP11.85□□□□□ -0.51
RNF4-215ENST00000511843 ZNF775Q96BV0 537 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms