RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SNU13P55769 128 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 STX1BP61266 288 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 ARG2P78540 354 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 GTF3C1Q12789 2109 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 CETN1Q12798 172 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 IHHQ14623 411 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SMU1Q2TAY7 513 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 KBTBD12Q3ZCT8 623 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 FAAP20Q6NZ36 180 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF613Q6PF04 617 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 DOLPP1Q86YN1 238 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SIAH3Q8IW03 269 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SYCP3Q8IZU3 236 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 LYG1Q8N1E2 194 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 CARNMT1Q8N4J0 409 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 TEX9Q8N6V9 391 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 TCEANCQ8N8B7 351 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 OR4D10Q8NGI6 311 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 PSMA8Q8TAA3 256 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF519Q8TB69 540 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SMARCD1Q96GM5 515 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 GPR137Q96N19 417 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF599Q96NL3 588 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 NEDD4LQ96PU5 975 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 KCNK16Q96T55 309 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SYT11Q9BT88 431 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 MCRIP2Q9BUT9 160 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 NLNQ9BYT8 704 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 WWTR1Q9GZV5 400 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 HOXD1Q9GZZ0 328 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 EXOC1Q9NV70 894 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SCML2Q9UQR0 700 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 NSG2Q9Y328 171 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 FADS3Q9Y5Q0 445 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 A0A087WWV3 80 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 TMEM89A2RUT3 159 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 LRRD1A4D1F6 860 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 ANKDD1BA6NHY2 528 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 H7C423 109 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 SLC1A7O00341 560 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 CLDN5O00501 218 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 SLC16A4O15374 487 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 TOX3O15405 576 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 SCO2O43819 266 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 FAM189A1O60320 539 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 RAD51DO75771 328 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 STATHP02808 62 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MT-ND2P03891 347 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 CTSLP07711 333 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 CCNB1P14635 433 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MX1P20591 662 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 PRKACGP22612 351 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 WARSP23381 471 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 CHRNA3P32297 505 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 SGSHP51688 502 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 UBXN1Q04323 297 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 ABRQ12979 859 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 PPA1Q15181 289 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 TRIM65Q6PJ69 517 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 ISLR2Q6UXK2 745 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 LMNTD2Q8IXW0 634 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 CATSPER1Q8NEC5 780 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 NUP37Q8NFH4 326 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 OR56A4Q8NGH8 313 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MGARPQ8TDB4 240 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 TAF4BQ92750 862 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 TBC1D31Q96DN5 1066 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 OMA1Q96E52 524 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 C9orf72Q96LT7 481 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 C17orf62Q9BQA9 187 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MED10Q9BTT4 135 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 GSDMCQ9BYG8 508 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 REG4Q9BYZ8 158 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 TRIM7Q9C029 511 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MMADHCQ9H3L0 296 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MTHFD2LQ9H903 347 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MED20Q9H944 212 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 AKIRIN1Q9H9L7 192 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 GPR173Q9NS66 373 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 CNIH4Q9P003 139 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 STOML2Q9UJZ1 356 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 POMT2Q9UKY4 750 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 RARRES3Q9UL19 164 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 COLEC10Q9Y6Z7 277 aa2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 HRNRQ86YZ3 2850 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-208ENST00000511439 MDC1Q14676 2089 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 TENM3Q9P273 2699 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 A0A087WZ39 114 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 TRIM49BA6NDI0 452 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 NKX6-3A6NJ46 265 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 KRTAP16-1A8MUX0 517 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 C9J4A7 227 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 E7EWF7 191 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 NPIPB9F8W1W9 429 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 UBFD1O14562 309 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 PGRMC2O15173 223 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 FMO6PO60774 539 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 SCRG1O75711 98 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 TM7SF2O76062 418 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms