RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GLIPR1L2Q4G1C9 344 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 HBMQ6B0K9 141 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 PLEKHM3Q6ZWE6 761 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 P4HA3Q7Z4N8 544 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 DHDDSQ86SQ9 333 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 PTOV1Q86YD1 416 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 DMRTC2Q8IXT2 367 aaPredicted RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 TOR1AIP2Q8NFQ8 470 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 OR2V1Q8NHB1 315 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 OSTF1Q92882 214 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 KLHL15Q96M94 604 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 TM9SF2Q99805 663 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 OR11A1Q9GZK7 315 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 OPN3Q9H1Y3 402 aaPredicted RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 RABEP2Q9H5N1 569 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 MTHFD2LQ9H903 347 aaPredicted RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 RNF122Q9H9V4 155 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 CTPS2Q9NRF8 586 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 ARMCX1Q9P291 453 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 GMPR2Q9P2T1 348 aaKnown RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 ZNF629Q9UEG4 869 aaPredicted RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 ZNF443Q9Y2A4 671 aaPredicted RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 FAM47E-STBD1D6RA91 191 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 LINC01387J3KSC0 135 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 DVL2O14641 736 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 GCM2O75603 506 aaPredicted RBP12.14□□□□□ -0.47
SNF8-206ENST00000509989 CGAP01215 116 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 TROVE2P10155 538 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNF8-206ENST00000509989 GPX2P18283 190 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 ENPP1P22413 925 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 EDNRAP25101 427 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 ACAA2P42765 397 aaKnown RBP12.14□□□□□ -0.47
SNF8-206ENST00000509989 IDH2P48735 452 aaKnown RBP12.14□□□□□ -0.47
SNF8-206ENST00000509989 MERTKQ12866 999 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 SGCBQ16585 318 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 ADGRG3Q86Y34 549 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 DPP10Q8N608 796 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 CNEP1R1Q8N9A8 125 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 ARL5BQ96KC2 179 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 MRGPRX4Q96LA9 322 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 ANKRD27Q96NW4 1050 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 SPOCK3Q9BQ16 436 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 CCDC106Q9BWC9 280 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 ACER3Q9NUN7 267 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 LEF1Q9UJU2 399 aaPredicted RBP12.14□□□□□ -0.47
SNF8-206ENST00000509989 SLC35A3Q9Y2D2 325 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 NDUFAF1Q9Y375 327 aa12.14□□□□□ -0.47
SNF8-206ENST00000509989 GPC6Q9Y625 555 aaPredicted RBP12.14□□□□□ -0.47
SNF8-206ENST00000509989 AKAP6Q13023 2319 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 LOC100653049A0A140TA62 436 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ZC3H12DA2A288 527 aaKnown RBP12.13□□□□□ -0.47
SNF8-206ENST00000509989 CDHR4A6H8M9 788 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ZNF814B7Z6K7 855 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 FXYD1O00168 92 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 SYT5O00445 386 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 KRT34O76011 436 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 PGM3O95394 542 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 DBIP07108 87 aaKnown RBP12.13□□□□□ -0.47
SNF8-206ENST00000509989 IL7RP16871 459 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 PGCP20142 388 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 AQP1P29972 269 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ASCL1P50553 236 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 GZMMP51124 257 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 CRISP3P54108 245 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 EPS8Q12929 822 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 NFYCQ13952 458 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 SF3B4Q15427 424 aaKnown RBP eCLIP12.13□□□□□ -0.478e-9■■■■□ 21.6
SNF8-206ENST00000509989 GCNT6Q5T4J0 391 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 METTL21CQ5VZV1 264 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ZNF474Q6S9Z5 364 aaPredicted RBP12.13□□□□□ -0.47
SNF8-206ENST00000509989 C22orf34Q6ZV56 151 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ESPNLQ6ZVH7 1005 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 CHMP1BQ7LBR1 199 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 SERPINA11Q86U17 422 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 POU5F2Q8N7G0 328 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ZNF610Q8N9Z0 462 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ZNF563Q8TA94 476 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 LINC01560Q8TB33 94 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ABHD3Q8WU67 409 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 CGREF1Q99674 301 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 SIKE1Q9BRV8 207 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 PIF1Q9H611 641 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 TMEM45AQ9NWC5 275 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 KLHL14Q9P2G3 628 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ING1Q9UK53 422 aaPredicted RBP12.13□□□□□ -0.47
SNF8-206ENST00000509989 TRIM33Q9UPN9 1127 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ZNF175Q9Y473 711 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 GMEB1Q9Y692 573 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 ANKHD1Q8IWZ3 2542 aaKnown RBP12.13□□□□□ -0.47
SNF8-206ENST00000509989 CSMD2Q7Z408 3487 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 CSMD1Q96PZ7 3565 aa12.13□□□□□ -0.47
SNF8-206ENST00000509989 A0A0G2JPF8 293 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 TMEM72A0PK05 275 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 A8MXE2 369 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 HNRNPCL2B2RXH8 293 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 HNRNPCL3B7ZW38 293 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms