RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 QPRTQ15274 297 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 NDUFAF6Q330K2 333 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 TIGD2Q4W5G0 525 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 C9orf135Q5VTT2 229 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 C3orf33Q6P1S2 294 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 BHLHB9Q6PI77 547 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 B3GLCTQ6Y288 498 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 OR5W2Q8NH69 310 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 PRR14Q9BWN1 585 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 TSPYL1Q9H0U9 437 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 REEP4Q9H6H4 257 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 TAS2R16Q9NYV7 291 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 TMEM216Q9P0N5 145 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 TMEFF2Q9UIK5 374 aaPredicted RBP9.1□□□□□ -0.95
MBD4-208ENST00000509828 METRNQ9UJH8 293 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 ICAM5Q9UMF0 924 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 TRAF6Q9Y4K3 522 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 ACTL7BQ9Y614 415 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 SLC25A15Q9Y619 301 aa9.1□□□□□ -0.95
MBD4-208ENST00000509828 PCNX3Q9H6A9 2034 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 IGHV4-61A0A0C4DH41 118 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 GOLGA8QA0A0J9YX86 632 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 GOLGA8OA6NCC3 632 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 GOLGA8NF8WBI6 632 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 GOLGA8RI6L899 631 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 SLC28A1O00337 649 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 ZNF264O43296 627 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 EIF4E2O60573 245 aaKnown RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 SNUPNO95149 360 aaKnown RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 WNT11O96014 354 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 HMGN2P05204 90 aaKnown RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 ERCC1P07992 297 aaPredicted RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 KRT16P08779 473 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 UBL4AP11441 157 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 EFNA1P20827 205 aaPredicted RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 EDNRAP25101 427 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 CASQ1P31415 396 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 MAP3K8P41279 467 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 DIO1P49895 249 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 ATP12AP54707 1039 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 FOXA1P55317 472 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 ACTG1P63261 375 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 TGFBR3Q03167 851 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 TP53BP2Q13625 1128 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 LASP1Q14847 261 aaKnown RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 KLHL26Q53HC5 615 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 C8orf74Q6P047 294 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 SPATA19Q7Z5L4 167 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 MTDHQ86UE4 582 aaKnown RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 C3orf56Q8N813 242 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 TMEM234Q8WY98 164 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 HOXB13Q92826 284 aaPredicted RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 CCDC126Q96EE4 140 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 C1orf159Q96HA4 380 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 TSSK3Q96PN8 268 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 STACQ99469 402 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 QRSL1Q9H0R6 528 aaKnown RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 PIGUQ9H490 435 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 MYOZ1Q9NP98 299 aaPredicted RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 C1orf109Q9NX04 203 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 ZNF180Q9UJW8 692 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 ING1Q9UK53 422 aaPredicted RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 AMDHD2Q9Y303 409 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 DTNAQ9Y4J8 743 aa9.09□□□□□ -0.95
MBD4-208ENST00000509828 SPIN1Q9Y657 262 aaPredicted RBP9.09□□□□□ -0.95
MBD4-208ENST00000509828 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 A0A087WUV0 522 aaPredicted RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 EXOC1LA0A1B0GW35 172 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 VSTM5A8MXK1 200 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 VWC2LB2RUY7 222 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 ATP6V1G2-DDX39BF2Z307 99 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 H3BQF6 201 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 SKAP2O75563 359 aaPredicted RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 KRT33AO76009 404 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 MYL2P10916 166 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 CREB1P16220 341 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 ZNF23P17027 643 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 CDH2P19022 906 aaPredicted RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 MAGEA8P43361 318 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 CHN2P52757 468 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 PRPS1P60891 318 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 GABRA6Q16445 453 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 DCST2Q5T1A1 773 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 CASP12Q6UXS9 341 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 TMPPEQ6ZT21 453 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 R3HCC1LQ7Z5L2 792 aaKnown RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 LCA5Q86VQ0 697 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 MEX3DQ86XN8 651 aaKnown RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 ANKS4BQ8N8V4 417 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 CLHC1Q8NHS4 586 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 ZNF563Q8TA94 476 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 PIGXQ8TBF5 258 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 DCAKDQ8WVC6 231 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 IFT81Q8WYA0 676 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 ZNF75CPQ92670 426 aaPredicted RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 L3HYPDHQ96EM0 354 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 DNAJA3Q96EY1 480 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms