RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 MTERF3Q96E29 417 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 TRMT61AQ96FX7 289 aaKnown RBP11.78□□□□□ -0.52
DDX41-210ENST00000509576 SDF2Q99470 211 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 C1orf50Q9BV19 199 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 CACNG6Q9BXT2 260 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 ACTRT3Q9BYD9 372 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 DTNAQ9Y4J8 743 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 SNX8Q9Y5X2 465 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
DDX41-210ENST00000509576 PRAMEF27A3QJZ7 478 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 OR5H1A6NKK0 313 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 SMIM23A6NLE4 172 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 KIF2AO00139 706 aaPredicted RBP11.77□□□□□ -0.53
DDX41-210ENST00000509576 PHF1O43189 567 aaPredicted RBP11.77□□□□□ -0.53
DDX41-210ENST00000509576 FESP07332 822 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 FGF4P08620 206 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 PABPC4LP0CB38 370 aaKnown RBP11.77□□□□□ -0.53
DDX41-210ENST00000509576 NEFHP12036 1026 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 HPGDP15428 266 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 ALDH3A1P30838 453 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 CASP9P55211 416 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 SESN3P58005 492 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 HBA1P69905 142 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 TMEM249Q2WGJ8 235 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 TIGD2Q4W5G0 525 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 ARL13AQ5H913 290 aaPredicted RBP11.77□□□□□ -0.53
DDX41-210ENST00000509576 ZCCHC23Q6ZST2 131 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 HMGN2P46Q86SG4 172 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 CLECL1Q8IZS7 167 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 ARIH2OSQ8N7S6 290 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 ZNF614Q8N883 585 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 FAM71CQ8NEG0 241 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 OR5W2Q8NH69 310 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 AGR3Q8TD06 166 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 COQ8BQ96D53 544 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 ZG16BQ96DA0 208 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 ARL5BQ96KC2 179 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 OR5B2Q96R09 309 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 RHOXF2Q9BQY4 288 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 THUMPD3Q9BV44 507 aaKnown RBP11.77□□□□□ -0.53
DDX41-210ENST00000509576 SLC17A7Q9P2U7 560 aa11.77□□□□□ -0.53
DDX41-210ENST00000509576 IGKV3D-15A0A087WSY6 115 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 FAM234BA2RU67 622 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 SERINC4A6NH21 518 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 ZNF724A8MTY0 619 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 A8MV72 311 aaPredicted RBP11.76□□□□□ -0.53
DDX41-210ENST00000509576 PDLIM1O00151 329 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 ZNF264O43296 627 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 PEX11AO75192 247 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 RAD51DO75771 328 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 UGT2B17O75795 530 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 ITGA5P08648 1049 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 UBL4AP11441 157 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 KRT4P19013 534 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 DIO1P49895 249 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 NAA20P61599 178 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 ZNF141Q15928 474 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 C6orf136Q5SQH8 315 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 TIMM23BQ5SRD1 257 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 SLC43A2Q8N370 569 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 WDR31Q8NA23 367 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 OR5P2Q8WZ92 322 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 CHMP6Q96FZ7 201 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 FANCFQ9NPI8 374 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 KLHL9Q9P2J3 617 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 TMED5Q9Y3A6 229 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 TRAF6Q9Y4K3 522 aa11.76□□□□□ -0.53
DDX41-210ENST00000509576 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
DDX41-210ENST00000509576 CLDN24A6NM45 220 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 TRIM13O60858 407 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 HSPA4LO95757 839 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 CREB1P16220 341 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 TTKP33981 857 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 ASMTP46597 345 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 ZNF83P51522 516 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 CCR4P51679 360 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 PHC1P78364 1004 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 GPR68Q15743 365 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 PODNL1Q6PEZ8 512 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 TMPPEQ6ZT21 453 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 CCDC103Q8IW40 242 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 TMCO5AQ8N6Q1 288 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 OR52E4Q8NGH9 312 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 OR52N5Q8NH56 324 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 OR2W6PQ8NHA6 318 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 SFXN5Q8TD22 340 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 ADAMTS15Q8TE58 950 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 REXO5Q96IC2 774 aaKnown RBP11.75□□□□□ -0.53
DDX41-210ENST00000509576 CCDC106Q9BWC9 280 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 C1QTNF6Q9BXI9 259 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 OR11A1Q9GZK7 315 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 NMUR2Q9GZQ4 415 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 LAT2Q9GZY6 243 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 MANSC1Q9H8J5 431 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 TIGARQ9NQ88 270 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 CTPS2Q9NRF8 586 aa11.75□□□□□ -0.53
DDX41-210ENST00000509576 ZDHHC2Q9UIJ5 367 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms