RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GJE1A6NN92 205 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 SLCO1B7G3V0H7 640 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 SIAH2O43255 324 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 DIAPH2O60879 1101 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 RAF1P04049 648 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 ADH6P28332 368 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 CHRNEQ04844 493 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 MERTKQ12866 999 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 SELENBP1Q13228 472 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 ALKBH2Q6NS38 261 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 C22orf34Q6ZV56 151 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 OR9I1Q8NGQ6 314 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 PIWIL2Q8TC59 973 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 RNF128Q8TEB7 428 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF75CPQ92670 426 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 CPNE4Q96A23 557 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 OR5B2Q96R09 309 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 TIGARQ9NQ88 270 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 PLSCR4Q9NRQ2 329 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 SLC6A13Q9NSD5 602 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF226Q9NYT6 803 aa13.22□□□□□ -0.29
UBE2D3-228ENST00000508974 PRRC2AP48634 2157 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 RFXANKO14593 260 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 SLC22A3O75751 556 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 ANP32DO95626 131 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 CHRM4P08173 479 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 IDO1P14902 403 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 PGCP20142 388 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 KLK2P20151 261 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 ENPP1P22413 925 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 PGM1P36871 562 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 SESN3P58005 492 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 PDCD4Q53EL6 469 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 AGBL2Q5U5Z8 902 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 C3orf33Q6P1S2 294 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 FCRLAQ7L513 359 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 NUFIP2Q7Z417 695 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 TUSC5Q8IXB3 177 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF563Q8TA94 476 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 MAELQ96JY0 434 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 FOXC2Q99958 501 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 GLRX2Q9NS18 164 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 EDARQ9UNE0 448 aa13.21□□□□□ -0.29
UBE2D3-228ENST00000508974 DEFB108AA8MXU0 73 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 UBDO15205 165 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 ATE1O95260 518 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 PABPC4LP0CB38 370 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 TFPIP10646 304 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 CCNA2P20248 432 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 TSC22D1Q15714 1073 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 GTDC1Q4AE62 458 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 SLC25A53Q5H9E4 307 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 TMEM201Q5SNT2 666 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 GTF2IRD2BQ6EKJ0 949 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 STAC2Q6ZMT1 411 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 PLEKHM3Q6ZWE6 761 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 GTF2IRD2Q86UP8 949 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 STK32CQ86UX6 486 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 GLB1L3Q8NCI6 653 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 ST8SIA1Q92185 356 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 CNOT9Q92600 299 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 VPS33AQ96AX1 596 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 ZNF775Q96BV0 537 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 SAP130Q9H0E3 1048 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 UBTD1Q9HAC8 227 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 CTPS2Q9NRF8 586 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 SLC35A3Q9Y2D2 325 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 USH1CQ9Y6N9 552 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 FREM1Q5H8C1 2179 aa13.2□□□□□ -0.3
UBE2D3-228ENST00000508974 AP3D1O14617 1153 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 KLF11O14901 512 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 PRKD3O94806 890 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 GOSR1O95249 250 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 IL6P05231 212 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 THBDP07204 575 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 NR2F1P10589 423 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 ETFAP13804 333 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 NID1P14543 1247 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 CRYGSP22914 178 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 CRATP43155 626 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 ANXA11P50995 505 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 KCNJ10P78508 379 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 PLAURQ03405 335 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 RNPS1Q15287 305 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 GSTA3Q16772 222 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 TTMPQ5BVD1 217 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 BEND4Q6ZU67 534 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 CXorf67Q86X51 503 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 ARFGAP2Q8N6H7 521 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 FAM71CQ8NEG0 241 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 LRRC8CQ8TDW0 803 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 TMEM234Q8WY98 164 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 ATP6V1G3Q96LB4 118 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 CXXC4Q9H2H0 198 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 SLC38A1Q9H2H9 487 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 SLCO1B3Q9NPD5 702 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms