RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 ZNF175Q9Y473 711 aa16.29■□□□□ 0.2
CLDND1-220ENST00000508902 SPG11Q96JI7 2443 aa16.29■□□□□ 0.2
CLDND1-220ENST00000508902 PRR14LQ5THK1 2151 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 IL18BPO95998 194 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 TROVE2P10155 538 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLDND1-220ENST00000508902 COX6B1P14854 86 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 GPX2P18283 190 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 RYKP34925 604 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 EIF1P41567 113 aaKnown RBP16.28■□□□□ 0.2
CLDND1-220ENST00000508902 ANXA11P50995 505 aaKnown RBP16.28■□□□□ 0.2
CLDND1-220ENST00000508902 GYS2P54840 703 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 KRTAP10-9P60411 292 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 KLF10Q13118 480 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 FADDQ13158 208 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 SF3B4Q15427 424 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLDND1-220ENST00000508902 PLEKHM3Q6ZWE6 761 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 DHDDSQ86SQ9 333 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 PTOV1Q86YD1 416 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 NFKBIDQ8NI38 313 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 STARD4Q96DR4 205 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 TM9SF2Q99805 663 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 CCDC106Q9BWC9 280 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 MTHFD2LQ9H903 347 aaPredicted RBP16.28■□□□□ 0.2
CLDND1-220ENST00000508902 LEF1Q9UJU2 399 aaPredicted RBP16.28■□□□□ 0.2
CLDND1-220ENST00000508902 TRIM33Q9UPN9 1127 aa16.28■□□□□ 0.2
CLDND1-220ENST00000508902 ZNF443Q9Y2A4 671 aaPredicted RBP16.28■□□□□ 0.2
CLDND1-220ENST00000508902 AKAP6Q13023 2319 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 A0A1W2PNR3 127 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 CDHR4A6H8M9 788 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 DVL2O14641 736 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 CGAP01215 116 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 PRG2P13727 222 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 ACAA2P42765 397 aaKnown RBP16.27■□□□□ 0.2
CLDND1-220ENST00000508902 ASCL1P50553 236 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 CRISP3P54108 245 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 MTPNP58546 118 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 CAPRIN1Q14444 709 aaKnown RBP16.27■□□□□ 0.2
CLDND1-220ENST00000508902 ESPNLQ6ZVH7 1005 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 BTLAQ7Z6A9 289 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 ATP6V1C2Q8NEY4 427 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 OR52P1PQ8NH57 321 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 ST8SIA1Q92185 356 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 ZFP3Q96NJ6 502 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 CGREF1Q99674 301 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 SLC39A3Q9BRY0 314 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 SFXN3Q9BWM7 321 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 RABEP2Q9H5N1 569 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 BCL2L10Q9HD36 194 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 CTPS2Q9NRF8 586 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 KLHL14Q9P2G3 628 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 CLEC4AQ9UMR7 237 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 ABCA4P78363 2273 aa16.27■□□□□ 0.2
CLDND1-220ENST00000508902 SYT5O00445 386 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 FRS3O43559 492 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 GCM2O75603 506 aaPredicted RBP16.26■□□□□ 0.19
CLDND1-220ENST00000508902 PGM3O95394 542 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 DBIP07108 87 aaKnown RBP16.26■□□□□ 0.19
CLDND1-220ENST00000508902 GKN3PP0CG01 181 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 GZMMP51124 257 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 SEC24CP53992 1094 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 SIRPAP78324 504 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 EPS8Q12929 822 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 SELENBP1Q13228 472 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 ZNF239Q16600 458 aaKnown RBP16.26■□□□□ 0.19
CLDND1-220ENST00000508902 TMEM176BQ3YBM2 270 aaPredicted RBP16.26■□□□□ 0.19
CLDND1-220ENST00000508902 GCNT6Q5T4J0 391 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 HBMQ6B0K9 141 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 CMIPQ8IY22 773 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 TSPEARQ8WU66 669 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 ROBO4Q8WZ75 1007 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 ANKRD27Q96NW4 1050 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 WFDC6Q9BQY6 131 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.26■□□□□ 0.19
CLDND1-220ENST00000508902 ING1Q9UK53 422 aaPredicted RBP16.26■□□□□ 0.19
CLDND1-220ENST00000508902 NDUFAF1Q9Y375 327 aa16.26■□□□□ 0.19
CLDND1-220ENST00000508902 OTOGQ6ZRI0 2925 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 EEF1E1-BLOC1S5C9J1V9 151 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 EEF1E1O43324 174 aaKnown RBP16.25■□□□□ 0.19
CLDND1-220ENST00000508902 IL7RP16871 459 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 PGCP20142 388 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 OPRM1P35372 400 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 EEFSECP57772 596 aaKnown RBP16.25■□□□□ 0.19
CLDND1-220ENST00000508902 RPS3AP61247 264 aaKnown RBP16.25■□□□□ 0.19
CLDND1-220ENST00000508902 MERTKQ12866 999 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 RNF220Q5VTB9 566 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 ZNF474Q6S9Z5 364 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-220ENST00000508902 P4HA3Q7Z4N8 544 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 LUZP2Q86TE4 346 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 ADGRG3Q86Y34 549 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 PMM1Q92871 262 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 OSTF1Q92882 214 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 RNASE6Q93091 150 aaKnown RBP16.25■□□□□ 0.19
CLDND1-220ENST00000508902 DNAJA3Q96EY1 480 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 ARMCX1Q9P291 453 aa16.25■□□□□ 0.19
CLDND1-220ENST00000508902 CCDC168Q8NDH2 2452 aa16.24■□□□□ 0.19
CLDND1-220ENST00000508902 IGHV3-15A0A0B4J1V0 119 aa16.24■□□□□ 0.19
CLDND1-220ENST00000508902 A0A0G2JPF8 293 aa16.24■□□□□ 0.19
CLDND1-220ENST00000508902 HNRNPCL2B2RXH8 293 aa16.24■□□□□ 0.19
CLDND1-220ENST00000508902 HNRNPCL3B7ZW38 293 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms