RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CMTM5Q96DZ9 223 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 C1GALT1C1Q96EU7 318 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 SH3YL1Q96HL8 342 aaPredicted RBP7.8□□□□□ -1.16
SNCA-211ENST00000508895 LURAP1Q96LR2 239 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 SFXN2Q96NB2 322 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 THUMPD3Q9BV44 507 aaKnown RBP7.8□□□□□ -1.16
SNCA-211ENST00000508895 HOXD1Q9GZZ0 328 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 BCL2L10Q9HD36 194 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 CHST11Q9NPF2 352 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 KCNJ16Q9NPI9 418 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 GID8Q9NWU2 228 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 CMTM6Q9NX76 183 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 CALML5Q9NZT1 146 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 ABCD2Q9UBJ2 740 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 TAGLN3Q9UI15 199 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 DKKL1Q9UK85 242 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 ICAM5Q9UMF0 924 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 VDAC3Q9Y277 283 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 CHST2Q9Y4C5 530 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 MED13LQ71F56 2210 aa7.8□□□□□ -1.16
SNCA-211ENST00000508895 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 CCT8L1PA6NM43 557 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 FAM220BPB1ANY3 271 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 HCRTR2O43614 444 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 ADAM11O75078 769 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 TNFSF13O75888 250 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 PGM3O95394 542 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 ACTL6AO96019 429 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 UBTFL6P0CB48 400 aaPredicted RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 NID1P14543 1247 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 GABRA1P14867 456 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 AQP1P29972 269 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 PCGF2P35227 344 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 TIMP3P35625 211 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 CLK3P49761 638 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 CRYBA2P53672 197 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 DSCR4P56555 118 aaPredicted RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 TLE4Q04727 773 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 C17orf67Q0P5P2 114 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 GANABQ14697 944 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 KRT72Q14CN4 511 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 CTU2Q2VPK5 515 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 PLPPR5Q32ZL2 321 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 MRPL2Q5T653 305 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 RNF220Q5VTB9 566 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 REEP3Q6NUK4 255 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 VWA1Q6PCB0 445 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 C22orf34Q6ZV56 151 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 ARPINQ7Z6K5 226 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 MTERF4Q7Z6M4 381 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 GGNQ86UU5 652 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 VRK2Q86Y07 508 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 LACC1Q8IV20 430 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 SLC15A3Q8IY34 581 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 TMCO5AQ8N6Q1 288 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 C11orf65Q8NCR3 313 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 HIPK4Q8NE63 616 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 ZPLD1Q8TCW7 415 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 INTS12Q96CB8 462 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 SPATA9Q9BWV2 254 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 LIME1Q9H400 295 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 PIF1Q9H611 641 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 EFCAB1Q9HAE3 211 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 SDHAF3Q9NRP4 125 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 DNAJB12Q9NXW2 375 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 JKAMPQ9P055 326 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 ANGPT4Q9Y264 503 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 ZNF443Q9Y2A4 671 aaPredicted RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 CARD8Q9Y2G2 431 aa7.79□□□□□ -1.16
SNCA-211ENST00000508895 MRPS18CQ9Y3D5 142 aaKnown RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 GPC6Q9Y625 555 aaPredicted RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 ZNF469Q96JG9 3925 aaPredicted RBP7.79□□□□□ -1.16
SNCA-211ENST00000508895 A0A0G2JPF8 293 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 A0A1W2PPR1 153 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 CDHR4A6H8M9 788 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 TMEM247A6NEH6 219 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 HNRNPCL2B2RXH8 293 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 HNRNPCL3B7ZW38 293 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 C5orf58C9J3I9 102 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 H0Y3Z8 333 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 H3BML4 177 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 H3BNH8 94 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 ZNF264O43296 627 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 SEC14L5O43304 696 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 HNRNPCL1O60812 293 aaKnown RBP7.78□□□□□ -1.16
SNCA-211ENST00000508895 DNAJA2O60884 412 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 GCM2O75603 506 aaPredicted RBP7.78□□□□□ -1.16
SNCA-211ENST00000508895 AQP8O94778 261 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 CSTAP01040 98 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 OPN1SWP03999 348 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 DBIP07108 87 aaKnown RBP7.78□□□□□ -1.16
SNCA-211ENST00000508895 THBS1P07996 1170 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 LINGO3P0C6S8 592 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 PABPC4LP0CB38 370 aaKnown RBP7.78□□□□□ -1.16
SNCA-211ENST00000508895 HNRNPCL4P0DMR1 293 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 TMIGD3P0DMS9 266 aaPredicted RBP7.78□□□□□ -1.16
SNCA-211ENST00000508895 T-ENOLP0DO92 83 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 ETS2P15036 469 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 CHMP24386 653 aa7.78□□□□□ -1.16
SNCA-211ENST00000508895 PTGER4P35408 488 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms