RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ADH4P08319 380 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SLC35G4P0C7Q5 338 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SMIM10L2AP0DMW4 78 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SMIM10L2BP0DMW5 78 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PPIAL4FP0DN26 164 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 NR2C1P13056 603 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CYBAP13498 195 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CHRNB2P17787 502 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 BMP5P22003 454 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CDH12P55289 794 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 RAC3P60763 192 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CTSL3PQ5NE16 218 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 FAM102AQ5T9C2 384 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR7E24Q6IFN5 339 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 LRRN1Q6UXK5 716 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ALKAL1Q6UXT8 129 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 Q6ZVU0 165 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ARCQ7LC44 396 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OTUB2Q96DC9 234 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ASB9Q96DX5 294 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SLC38A2Q96QD8 506 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 UBL7Q96S82 380 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 HAPLN2Q9GZV7 340 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 WDR55Q9H6Y2 383 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 GDE1Q9NZC3 331 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TCAF1Q9Y4C2 921 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PPIAL4AQ9Y536 164 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CHST1O43916 411 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 DUSP11O75319 330 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 DEAF1O75398 565 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF205O95201 554 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 VAPBO95292 243 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 DBHP09172 617 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CYP11B1P15538 503 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CELP19835 753 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 IMPDH1P20839 514 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PRPH2P23942 346 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CDK9P50750 372 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MRPS34P82930 218 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 AESQ08117 197 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CRMP1Q14194 572 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR4D1Q15615 310 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TSNQ15631 228 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CST9Q5W186 159 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 GJB7Q6PEY0 223 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 KCTD18Q6PI47 426 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 Q6ZVL8 140 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MON1BQ7L1V2 547 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 FAM90A1Q86YD7 464 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 THAP8Q8NA92 274 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TSTD1Q8NFU3 115 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR4D9Q8NGE8 314 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR6K2Q8NGY2 324 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR2L8Q8NGY9 312 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR2T3Q8NH03 318 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SLC35B2Q8TB61 432 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SSMEM1Q8WWF3 244 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 RERGQ96A58 199 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 KLHL32Q96NJ5 620 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MAPKAP1Q9BPZ7 522 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OSBPL11Q9BXB4 747 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ACSS1Q9NUB1 689 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PAQR5Q9NXK6 330 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 GIN1Q9NXP7 522 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 STOML1Q9UBI4 398 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CCDC182A6NF36 153 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 NPIPB11E5RHQ5 1161 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 J3QR06 171 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 LEFTY2O00292 366 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 NME2P1O60361 137 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SNNO75324 88 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TYMSP04818 313 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RHOP08100 348 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR13C7P0DN81 318 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 UNGP13051 313 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ACO1P21399 889 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RGRP47804 291 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 EEFSECP57772 596 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TAS2R60P59551 318 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR2B8PP59922 312 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ENPP2Q13822 863 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 NEDD8Q15843 81 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 GABRA6Q16445 453 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CYP1B1Q16678 543 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ADPRMQ3LIE5 342 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RNLSQ5VYX0 342 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 METTL21CQ5VZV1 264 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 LHX8Q68G74 356 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 HBMQ6B0K9 141 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 FCRL6Q6DN72 434 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RBPMS2Q6ZRY4 209 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SLC13A5Q86YT5 568 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 LRRC52Q8N7C0 313 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TERB1Q8NA31 727 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CATSPER1Q8NEC5 780 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SDR9C7Q8NEX9 313 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR13C6PQ8NH95 151 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 BBS10Q8TAM1 723 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RPL3LQ92901 407 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 GLYATL1Q969I3 302 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms