RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 FAM214AQ32MH5 1076 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 MANEAQ5SRI9 462 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 C6orf183Q5T699 404 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 LHFPL3Q86UP9 236 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 BRIX1Q8TDN6 353 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CDS1Q92903 461 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CREB3L1Q96BA8 519 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC35A4Q96G79 324 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 RPRD1BQ9NQG5 326 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 GPR52Q9Y2T5 361 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 YARS2Q9Y2Z4 477 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 SIT1Q9Y3P8 196 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CABIN1Q9Y6J0 2220 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 IGHV5-51A0A0C4DH38 117 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 LILRA5A6NI73 299 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CPSF4LA6NMK7 179 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 FRS3O43559 492 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 HPGDSO60760 199 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CDC123O75794 336 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 RGS9O75916 674 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ATP1B1P05026 303 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 GNSP15586 552 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 TALDO1P37837 337 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ATP12AP54707 1039 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 GNG2P59768 71 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 FAPQ12884 760 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF155Q12901 538 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 DUSP5Q16690 384 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 TATDN3Q17R31 274 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF322Q6U7Q0 402 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF620Q6ZNG0 422 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 TPRA1Q86W33 373 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 LSRQ86X29 649 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 LRRC28Q86X40 367 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 C17orf82Q86X59 251 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 VRK2Q86Y07 508 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 PMM1Q92871 262 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC41A3Q96GZ6 507 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 MCHR1Q99705 422 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 TTYH2Q9BSA4 534 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 GTPBP2Q9BX10 602 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 RERGLQ9H628 205 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ADAP2Q9NPF8 381 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ACOXLQ9NUZ1 547 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 BABAM2Q9NXR7 383 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CNIH4Q9P003 139 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 HCN3Q9P1Z3 774 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 SPACA6W5XKT8 324 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 THADAQ6YHU6 1953 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 PCDH15Q96QU1 1955 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 ASXL3Q9C0F0 2248 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 OR2W5A6NFC9 320 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 OR6C70A6NIJ9 312 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 BCAT2O15382 392 aaPredicted RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 PIAS2O75928 621 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 GPR75O95800 540 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 THBS1P07996 1170 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 CT62P0C5K7 136 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 FAM157BP0CG42 384 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 PSKH1P11801 424 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 GZMKP49863 264 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 AFF3P51826 1226 aaKnown RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 TAS2R43P59537 309 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 LSM11P83369 360 aaKnown RBP eCLIP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 EXOSC7Q15024 291 aaKnown RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 ANGPT1Q15389 498 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 PRTGQ2VWP7 1150 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 C14orf28Q4W4Y0 310 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 CCNJQ5T5M9 372 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 FHL5Q5TD97 284 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 DGAT2L6Q6ZPD8 337 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 GDF7Q7Z4P5 450 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 RANBP3LQ86VV4 465 aaPredicted RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 METTL27Q8N6F8 245 aaPredicted RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 ACBD7Q8N6N7 88 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 SYT14Q8NB59 555 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 OR52L1Q8NGH7 329 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 OR4Q3Q8NH05 313 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 SPRYD4Q8WW59 207 aaPredicted RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 TCTN2Q96GX1 697 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 SECISBP2Q96T21 854 aaKnown RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF649Q9BS31 505 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 TMED9Q9BVK6 235 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 PRR14Q9BWN1 585 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 SOHLH2Q9NX45 425 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 PTGFRNQ9P2B2 879 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 GPR55Q9Y2T6 319 aaPredicted RBP10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 CHST2Q9Y4C5 530 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 MAU2Q9Y6X3 613 aa10.18□□□□□ -0.78
SH3RF1-203ENST00000508685 CENPVL1A0A0U1RR11 272 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 A0A1B0GVT2 93 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 J3QRE1 110 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RNF13O43567 381 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 MYF5P13349 255 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 BMP7P18075 431 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 NT5EP21589 574 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RFX3P48380 749 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms