RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 Q9H521 79 aa13.14□□□□□ -0.31
HMGCLL1-208ENST00000508459 DKKL1Q9UK85 242 aa13.14□□□□□ -0.31
HMGCLL1-208ENST00000508459 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
HMGCLL1-208ENST00000508459 MED31Q9Y3C7 131 aa13.14□□□□□ -0.31
HMGCLL1-208ENST00000508459 TESMINQ9Y4I5 508 aa13.14□□□□□ -0.31
HMGCLL1-208ENST00000508459 LYVE1Q9Y5Y7 322 aa13.14□□□□□ -0.31
HMGCLL1-208ENST00000508459 URB1O60287 2271 aaKnown RBP13.14□□□□□ -0.31
HMGCLL1-208ENST00000508459 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 A0A1B0GWA3 101 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 ZNF208O43345 1280 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 ZNF354AO60765 605 aaPredicted RBP13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 ADAP00813 363 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 GKN3PP0CG01 181 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 ERFP50548 548 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 RPS6KA3P51812 740 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 UGT2B15P54855 530 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 MERTKQ12866 999 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 PIN1Q13526 163 aaPredicted RBP13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 QPRTQ15274 297 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 IQCCQ4KMZ1 466 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 RPUSD3Q6P087 351 aaKnown RBP13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 GATSQ8NAP1 163 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 ICA1LQ8NDH6 482 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 OR2M3Q8NG83 312 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 OR10Q1Q8NGQ4 319 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 RNF217Q8TC41 542 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 C1GALT1C1Q96EU7 318 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 SH3YL1Q96HL8 342 aaPredicted RBP13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 ADAM19Q9H013 955 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 C15orf41Q9Y2V0 281 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 CHST2Q9Y4C5 530 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 WDFY3Q8IZQ1 3526 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 CEP295Q9C0D2 2601 aa13.13□□□□□ -0.31
HMGCLL1-208ENST00000508459 APC2O95996 2303 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 A0A087WUJ7 227 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 CENPVL1A0A0U1RR11 272 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 CLDN24A6NM45 220 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 OR10H3O60404 316 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 RASAL1O95294 804 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 EPPINO95925 133 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 CRYABP02511 175 aaKnown RBP13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 DPP4P27487 766 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 ALDH3A2P51648 485 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 SESN3P58005 492 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 PLGLB1Q02325 96 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 SELENBP1Q13228 472 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 OGFRL1Q5TC84 451 aaPredicted RBP13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 PRAMEF20Q5VT98 475 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 C3orf33Q6P1S2 294 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 MBOAT2Q6ZWT7 520 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 OLIG3Q7RTU3 272 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 GDF7Q7Z4P5 450 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 STK32CQ86UX6 486 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 GTPBP8Q8N3Z3 284 aaPredicted RBP13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 ATG16L2Q8NAA4 619 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 OR2M7Q8NG81 312 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 TMEM239Q8WW34 195 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 PRRG3Q9BZD7 231 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 DSN1Q9H410 356 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 GALNT9Q9HCQ5 603 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 PAQR5Q9NXK6 330 aaPredicted RBP13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 USE1Q9NZ43 259 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 FLRT3Q9NZU0 649 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 SLC7A7Q9UM01 511 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 OAZ3Q9UMX2 235 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 POFUT2Q9Y2G5 429 aa13.12□□□□□ -0.31
HMGCLL1-208ENST00000508459 SH3PXD2BA1X283 911 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 A8MVM7 634 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 MT-ATP6P00846 226 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 MT-ND1P03886 318 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 TNFRSF1BP20333 461 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 PTGDSP41222 190 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 LIMS1P48059 325 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 PTDSS1P48651 473 aaKnown RBP13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 SLC9A3P48764 834 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 NUP107P57740 925 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 CXADRP78310 365 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 SRSF6Q13247 344 aaKnown RBP13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 ZNF169Q14929 603 aaPredicted RBP13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 SF3B4Q15427 424 aaKnown RBP eCLIP13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 PDSS1Q5T2R2 415 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 SPINK14Q6IE38 97 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 CBLN3Q6UW01 205 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 MDGA2Q7Z553 956 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 HMGN2P46Q86SG4 172 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 AMIGO2Q86SJ2 522 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 ZFP62Q8NB50 900 aaPredicted RBP13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 OR10G2Q8NGC3 310 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 C3orf49Q96BT1 292 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 ZNF426Q9BUY5 554 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 SEMA6AQ9H2E6 1030 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 MED17Q9NVC6 651 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 PDP1Q9P0J1 537 aaPredicted RBP13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 CHRNA9Q9UGM1 479 aa13.11□□□□□ -0.31
HMGCLL1-208ENST00000508459 FRS3O43559 492 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms