RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 BBS2Q9BXC9 721 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 MAGT1Q9H0U3 335 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 ATG10Q9H0Y0 220 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 PSTPIP2Q9H939 334 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 TUBG2Q9NRH3 451 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 ABCB10Q9NRK6 738 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 NRBP2Q9NSY0 501 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 VNN3Q9NY84 501 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 CNOT2Q9NZN8 540 aaKnown RBP3.75□□□□□ -1.81
GYPA-205ENST00000508337 SLC2A6Q9UGQ3 507 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 MRPS33Q9Y291 106 aaKnown RBP3.75□□□□□ -1.81
GYPA-205ENST00000508337 DHRS7Q9Y394 339 aa3.75□□□□□ -1.81
GYPA-205ENST00000508337 ABCC4O15439 1325 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 ZCCHC6Q5VYS8 1495 aaKnown RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 ADAMTS9Q9P2N4 1935 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 A0A1B0GUL7 405 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 H0Y9J4 135 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 ABCD4O14678 606 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 ADAM12O43184 909 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 RNF13O43567 381 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 TYROBPO43914 113 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 TRIM3O75382 744 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 ECDO95905 644 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 CHRNA1P02708 482 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 WNT2P09544 360 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 PTNP21246 168 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 CD1BP29016 333 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 ACVR1BP36896 505 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 BCAP31P51572 246 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 CCL11P51671 97 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 CCNHP51946 323 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 CRYBB1P53674 252 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 SRYQ05066 204 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 ZNF33BQ06732 778 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 PTCH1Q13635 1447 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 NCAPD2Q15021 1401 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 NCF4Q15080 339 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 ANGPT1Q15389 498 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 PAN3Q58A45 887 aaKnown RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 SPANXN2Q5MJ10 180 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 BEND6Q5SZJ8 279 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 ERO1BQ86YB8 467 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 CERS5Q8N5B7 392 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 COMMD1Q8N668 190 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 LRRC17Q8N6Y2 441 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 OR4F17Q8NGA8 305 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 CCDC26Q8TAB7 109 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 U2AF1L4Q8WU68 220 aaKnown RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 CCDC12Q8WUD4 166 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 PDCD6IPQ8WUM4 868 aaKnown RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 PHYHIPQ92561 330 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 SGK3Q96BR1 496 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 C4orf36Q96KX1 117 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 C7orf34Q96L11 122 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 OR4F4Q96R69 305 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 NPAS2Q99743 824 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 BPIFA3Q9BQP9 254 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 FAM124BQ9H5Z6 455 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 CHRAC1Q9NRG0 131 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 SDHAF3Q9NRP4 125 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 EMC3Q9P0I2 261 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 STX18Q9P2W9 335 aaKnown RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 Q9UF83 564 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 PACSIN2Q9UNF0 486 aaPredicted RBP3.74□□□□□ -1.81
GYPA-205ENST00000508337 CHMP2BQ9UQN3 213 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 PARD3Q8TEW0 1356 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 PLEKHG2Q9H7P9 1386 aa3.74□□□□□ -1.81
GYPA-205ENST00000508337 SF3B1O75533 1304 aaKnown RBP eCLIP3.73□□□□□ -1.813e-6■■■■■ 137.9
GYPA-205ENST00000508337 IGHV3-35A0A0C4DH35 117 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 HEATR9A2RTY3 570 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 OR6C65A6NJZ3 312 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 LRRIQ3A6PVS8 624 aaPredicted RBP3.73□□□□□ -1.81
GYPA-205ENST00000508337 FAM220BPB1ANY3 271 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 TCP11X1B4DZS4 312 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 CDH16O75309 829 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 SNNO75324 88 aaPredicted RBP3.73□□□□□ -1.81
GYPA-205ENST00000508337 CLPXO76031 633 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 PGK1P00558 417 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 GLAP06280 429 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 CA3P07451 260 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 IGFBP1P08833 259 aaPredicted RBP3.73□□□□□ -1.81
GYPA-205ENST00000508337 CT45A10P0DMU9 189 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 SDC1P18827 310 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 ATP5C1P36542 298 aaKnown RBP3.73□□□□□ -1.81
GYPA-205ENST00000508337 FDFT1P37268 417 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 RGS4P49798 205 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 CLDN8P56748 225 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 SARNPP82979 210 aaKnown RBP3.73□□□□□ -1.81
GYPA-205ENST00000508337 CNTN2Q02246 1040 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 ZNF85Q03923 595 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 PUDPQ08623 228 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 ITGB3BPQ13352 177 aaPredicted RBP3.73□□□□□ -1.81
GYPA-205ENST00000508337 AANATQ16613 207 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 ATF7IP2Q5U623 682 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 LRRC66Q68CR7 880 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 PRR5LQ6MZQ0 368 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 EIF3MQ7L2H7 374 aaKnown RBP3.73□□□□□ -1.81
GYPA-205ENST00000508337 NKAIN4Q8IVV8 208 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 SLC34A3Q8N130 599 aa3.73□□□□□ -1.81
GYPA-205ENST00000508337 BCORP1Q8N888 145 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms