RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CLCC1Q96S66 551 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 CITED1Q99966 193 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 TIGARQ9NQ88 270 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 KLHL28Q9NXS3 571 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 IL36GQ9NZH8 169 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 BFARQ9NZS9 450 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 SLC2A6Q9UGQ3 507 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 IKZF2Q9UKS7 526 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 TIMM10BQ9Y5J6 103 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 PNPLA6Q8IY17 1366 aa3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.22□□□□□ -1.89
TRAPPC13-209ENST00000508304 USP6P35125 1406 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 A0A1B0GTH9 108 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 NCF1BA6NI72 391 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 NCF1CA8MVU1 366 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 H3BMQ9 156 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 RGS16O15492 202 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF264O43296 627 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 SRPX2O60687 465 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 RAMP1O60894 148 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 UGT2B17O75795 530 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 DIRAS1O95057 198 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 WNT2P09544 360 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ANXA8P13928 327 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 SELEP16581 610 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CHMLP26374 656 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 NMT1P30419 496 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 YWHABP31946 246 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CCR1P32246 355 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CDH5P33151 784 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 P2RY1P47900 373 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 POU3F4P49335 361 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 STARP49675 285 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ATP4BP51164 291 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ACY1Q03154 408 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 RIPPLY1Q0D2K3 151 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 IL18Q14116 193 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ABRAXAS2Q15018 415 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 NDUFA9Q16795 377 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 PCK2Q16822 640 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CYP51A1Q16850 503 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 TMEM44Q2T9K0 475 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 TRIM16LQ309B1 348 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 DMRTC1Q5HYR2 192 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ANXA8L1Q5VT79 327 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 FAHD2BQ6P2I3 314 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 RNASEKQ6P5S7 137 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 EMBQ6PCB8 327 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 BAIAP2L2Q6UXY1 529 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 TPRA1Q86W33 373 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CDR2LQ86X02 465 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CARM1Q86X55 608 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ECHDC2Q86YB7 292 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 C4orf32Q8N8J7 132 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 MFSD9Q8NBP5 474 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CCDC148Q8NFR7 591 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR2T33Q8NG76 320 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 C11orf52Q96A22 123 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 MCUR1Q96AQ8 359 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CXorf40BQ96DE9 158 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 C11orf24Q96F05 449 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 FAHD2AQ96GK7 314 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 PIWIL1Q96J94 861 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 MS4A14Q96JA4 679 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 CFAP53Q96M91 514 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC38A2Q96QD8 506 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 MTG1Q9BT17 334 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 OCR1Q9BZK8 76 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLITRK2Q9H156 845 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 AZI2Q9H6S1 392 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 NEK6Q9HC98 313 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 EXOSC3Q9NQT5 275 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF107Q9UII5 783 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF221Q9UK13 617 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 PRPF19Q9UMS4 504 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 COPS3Q9UNS2 423 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 NTNG1Q9Y2I2 539 aa3.21□□□□□ -1.9
TRAPPC13-209ENST00000508304 E7ESA3 106 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 F5H6K3 240 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 ABCD4O14678 606 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 RS1O15537 224 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 DNAJB6O75190 326 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 ATP5LO75964 103 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 CLDN9O95484 217 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 AP2A1O95782 977 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 PRB2P02812 416 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 ASGR1P07306 291 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 H2AFZP0C0S5 128 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 MCF2P10911 925 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 BCL3P20749 454 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 MMP11P24347 488 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 UGT1A5P35504 534 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 CCT6AP40227 531 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 TNNT2P45379 298 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 GYG1P46976 350 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 CASP4P49662 377 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 EFNB2P52799 333 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 PRMT2P55345 433 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 RPL8P62917 257 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF33BQ06732 778 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms