RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 TRNT1Q96Q11 434 aaKnown RBP8.41□□□□□ -1.06
DDX41-209ENST00000508279 POLDIP3Q9BY77 421 aaKnown RBP8.41□□□□□ -1.06
DDX41-209ENST00000508279 SRXN1Q9BYN0 137 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 KLHL4Q9C0H6 718 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 SLC38A1Q9H2H9 487 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 CACYBPQ9HB71 228 aaKnown RBP8.41□□□□□ -1.06
DDX41-209ENST00000508279 TIGARQ9NQ88 270 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 SERINC1Q9NRX5 453 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 PAQR5Q9NXK6 330 aaPredicted RBP8.41□□□□□ -1.06
DDX41-209ENST00000508279 JKAMPQ9P055 326 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 LIPT1Q9Y234 373 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 EMC9Q9Y3B6 208 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 PCDHB14Q9Y5E9 798 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 AKAP6Q13023 2319 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 FREM1Q5H8C1 2179 aa8.41□□□□□ -1.06
DDX41-209ENST00000508279 TACC2O95359 2948 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ANKRD17O75179 2603 aaKnown RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 SH3D21A4FU49 640 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 A6NNC1 897 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ENO4A6NNW6 628 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 CLIC1O00299 241 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 AP3D1O14617 1153 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 MSTNO14793 375 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 CASKO14936 926 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ADAMDEC1O15204 470 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 EPXP11678 715 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 CAPN3P20807 821 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 IDH2P48735 452 aaKnown RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 CRISP3P54108 245 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 TXNL4AP83876 142 aaKnown RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 GNA13Q14344 377 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 SQLEQ14534 574 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ZNF239Q16600 458 aaKnown RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 MRPL2Q5T653 305 aaKnown RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 LCE2DQ5TA82 110 aaPredicted RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 ANKRD34AQ69YU3 496 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 GTF2IRD2BQ6EKJ0 949 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 C3orf33Q6P1S2 294 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ZNF474Q6S9Z5 364 aaPredicted RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 PLEKHM3Q6ZWE6 761 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 FAM214BQ7L5A3 538 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ZNF550Q7Z398 422 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 CDH24Q86UP0 819 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 GTF2IRD2Q86UP8 949 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 VRK2Q86Y07 508 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 FUNDC1Q8IVP5 155 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ABHD3Q8WU67 409 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ST8SIA1Q92185 356 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 GTF2H4Q92759 462 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 CPNE4Q96A23 557 aaPredicted RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 ZC3HAV1LQ96H79 300 aaKnown RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 TMEM19Q96HH6 336 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 GMPPAQ96IJ6 420 aaPredicted RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 SLC39A3Q9BRY0 314 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 PAIP1Q9H074 479 aaKnown RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 SAP130Q9H0E3 1048 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 CLEC4MQ9H2X3 399 aaPredicted RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 MTHFD2LQ9H903 347 aaPredicted RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 CTPS2Q9NRF8 586 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 ZNF446Q9NWS9 450 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 KLHL28Q9NXS3 571 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.4□□□□□ -1.06
DDX41-209ENST00000508279 NDRG3Q9UGV2 375 aa8.4□□□□□ -1.06
DDX41-209ENST00000508279 POLQO75417 2590 aa8.4□□□□□ -1.07
DDX41-209ENST00000508279 ANKHD1Q8IWZ3 2542 aaKnown RBP8.4□□□□□ -1.07
DDX41-209ENST00000508279 A0A096LPI6 279 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 AGAP5A6NIR3 686 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 C5orf58C9J3I9 102 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 EDF1O60869 148 aaKnown RBP8.39□□□□□ -1.07
DDX41-209ENST00000508279 CTAG2O75638 210 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 NTN1O95631 604 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 DBIP07108 87 aaKnown RBP8.39□□□□□ -1.07
DDX41-209ENST00000508279 VIMP08670 466 aaKnown RBP8.39□□□□□ -1.07
DDX41-209ENST00000508279 NUDT7P0C024 238 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 GKN3PP0CG01 181 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 ZCCHC18P0CG32 403 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 CD1EP15812 388 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 ENPP1P22413 925 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 CD79BP40259 229 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 MVDP53602 400 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 SORDQ00796 357 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 RGNQ15493 299 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 HSP90B2PQ58FF3 399 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 SLC25A53Q5H9E4 307 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 PAGE3Q5JUK9 113 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 TMEM201Q5SNT2 666 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 ALKBH2Q6NS38 261 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 BLOC1S3Q6QNY0 202 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 ZNF836Q6ZNA1 936 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 FCRLAQ7L513 359 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 LURAP1LQ8IV03 231 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 TUSC5Q8IXB3 177 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 CADM2Q8N3J6 435 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 OR6K3Q8NGY3 331 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 OR52P1PQ8NH57 321 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 SLC38A5Q8WUX1 472 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 MAL2Q969L2 176 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
DDX41-209ENST00000508279 MED18Q9BUE0 208 aa8.39□□□□□ -1.07
DDX41-209ENST00000508279 RAD21L1Q9H4I0 556 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms