RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 OR3A2P47893 321 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 CASP9P55211 416 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 VSNL1P62760 191 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 EMX2Q04743 252 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 MAD2L1Q13257 205 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 ITGADQ13349 1161 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 TNK1Q13470 666 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 VEZF1Q14119 521 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 P2RY6Q15077 328 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF141Q15928 474 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 PDCD2Q16342 344 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 CLEC12BQ2HXU8 276 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 TIGD2Q4W5G0 525 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 C16orf62Q7Z3J2 963 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 C6orf120Q7Z4R8 191 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 PIAS4Q8N2W9 510 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 OR4A15Q8NGL6 344 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 ARL8AQ96BM9 186 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 PKNOX2Q96KN3 472 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 PPP1R36Q96LQ0 422 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 LAT2Q9GZY6 243 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 OR51I1Q9H343 314 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 ASIC5Q9NY37 505 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 MKLN1Q9UL63 735 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 DPRXA6NFQ7 191 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 DUXAA6NLW8 204 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 C9JVG2 144 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 OVOL3O00110 214 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ITM2AO43736 263 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 TYROBPO43914 113 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 DNAJA2O60884 412 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 UGT2B17O75795 530 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 LYZL6O75951 148 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 FESP07332 822 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 DANCRP0C864 163 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 UBTFL6P0CB48 400 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 CDKN1AP38936 164 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ETV4P43268 484 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 SESN3P58005 492 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 BSPH1Q075Z2 132 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 RASGEF1BQ0VAM2 473 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 MERTKQ12866 999 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 FAPQ12884 760 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 STK11Q15831 433 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ARHGAP11BQ3KRB8 267 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF672Q499Z4 452 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 Q6ZT83 130 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 NUDCD3Q8IVD9 361 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 PIWIL2Q8TC59 973 aaKnown RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 SMAP2Q8WU79 429 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 TMEM234Q8WY98 164 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ST8SIA1Q92185 356 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 GTPBP3Q969Y2 492 aaKnown RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF775Q96BV0 537 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 TRMT61AQ96FX7 289 aaKnown RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ROPN1BQ9BZX4 212 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF350Q9GZX5 532 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 ROPN1Q9HAT0 212 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 SERINC1Q9NRX5 453 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 MAGED1Q9Y5V3 778 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 HIVEP2P31629 2446 aa10.22□□□□□ -0.77
HMGCS1-204ENST00000507293 CADP27708 2225 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 CSPG4Q6UVK1 2322 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 A0A1W2PP18 115 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 WDR91A4D1P6 747 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF724A8MTY0 619 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 RNASET2O00584 256 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 KIAA0513O60268 411 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 BCAS1O75363 584 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 CPSF4O95639 269 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 PGCP20142 388 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 COX5AP20674 150 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 IGHV1-2P23083 117 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 PGM1P36871 562 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 DIO1P49895 249 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 KRTAP1-1Q07627 177 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 FUT5Q11128 374 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 PPA1Q15181 289 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 MAPK14Q16539 360 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 SMU1Q2TAY7 513 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 SYT14P1Q58G82 188 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ABLIM2Q6H8Q1 611 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 TYW3Q6IPR3 259 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 HEPHL1Q6MZM0 1159 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 EIF3MQ7L2H7 374 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 HMGN2P46Q86SG4 172 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ANKRD46Q86W74 232 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF100Q8IYN0 542 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF781Q8N8C0 355 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 FAM71CQ8NEG0 241 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 MIPOL1Q8TD10 442 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 AENQ8WTP8 325 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 SLC25A43Q8WUT9 341 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF75CPQ92670 426 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 RAB8BQ92930 207 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms