RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ZNF611Q8N823 705 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 GLB1L3Q8NCI6 653 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 RFWD2Q8NHY2 731 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 NEURL3Q96EH8 262 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 NPAS1Q99742 590 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 POTEKPQ9BYX7 375 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 SAP130Q9H0E3 1048 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 OR51I1Q9H343 314 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 ESRP2Q9H6T0 727 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 C12orf49Q9H741 205 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 COQ10BQ9H8M1 238 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 MEAF6Q9HAF1 191 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 KCNK9Q9NPC2 374 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 EXOSC3Q9NQT5 275 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 EMC3Q9P0I2 261 aa12.85□□□□□ -0.35
HMGCS1-203ENST00000507004 DSCAMO60469 2012 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 TRPC5OSA6NMA1 111 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 EFNA2O43921 213 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 ZNF500O60304 480 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 CYTIPO60759 359 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 DIAPH2O60879 1101 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 UGT2B17O75795 530 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 CYP7B1O75881 506 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 CPSF4O95639 269 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 THBDP07204 575 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 UQCRBP14927 111 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 SHC1P29353 583 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 CHI3L1P36222 383 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 HTR3AP46098 478 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 ITGADQ13349 1161 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 HHATQ5VTY9 493 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 SAXO2Q658L1 398 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 TMPPEQ6ZT21 453 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 P2RY8Q86VZ1 359 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 WFDC8Q8IUA0 241 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 TUSC5Q8IXB3 177 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 RAB3IL1Q8TBN0 382 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 XAGE5Q8WWM1 108 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 KISS1RQ969F8 398 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 ROPN1LQ96C74 230 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 CCDC115Q96NT0 180 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 SORT1Q99523 831 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 ZBTB18Q99592 522 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 TMEM204Q9BSN7 226 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 THUMPD3Q9BV44 507 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 SRXN1Q9BYN0 137 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 CENPHQ9H3R5 247 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 MARCOQ9UEW3 520 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 MKLN1Q9UL63 735 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 HDGFL3Q9Y3E1 203 aa12.84□□□□□ -0.35
HMGCS1-203ENST00000507004 ESPNB1AK53 854 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 GPR171O14626 319 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 HS3ST1O14792 307 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 OIP5O43482 229 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 FCMRO60667 390 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 GCM2O75603 506 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 UBTFL6P0CB48 400 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 OR12D1P0DN82 309 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 BGNP21810 368 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 OR3A2P47893 321 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 SLC18A1P54219 525 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 SESN3P58005 492 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 RPS26P62854 115 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 RASGEF1BQ0VAM2 473 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 MERTKQ12866 999 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 SYT14P1Q58G82 188 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 C1QTNF12Q5T7M4 302 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 ATG16L1Q676U5 607 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 Q6ZT83 130 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 YTHDF3Q7Z739 585 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 KRTAP1-3Q8IUG1 177 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 FAM71CQ8NEG0 241 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 ATP6V1C2Q8NEY4 427 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 ZNF563Q8TA94 476 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 PLPPR2Q96GM1 343 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 PPP1R36Q96LQ0 422 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 HS3ST6Q96QI5 342 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 OR5B2Q96R09 309 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 PSD2Q9BQI7 771 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 SLC35A5Q9BS91 424 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 SERHL2Q9H4I8 314 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 THAP1Q9NVV9 213 aa12.83□□□□□ -0.36
HMGCS1-203ENST00000507004 SULT2B1O00204 365 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 HDAC3O15379 428 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 KRT75O95678 551 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 CD3EP07766 207 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 PGM1P36871 562 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 KCNJ10P78508 379 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 BST1Q10588 318 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 ETFDHQ16134 617 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 ZSWIM7Q19AV6 140 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 FAM174BQ3ZCQ3 159 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 GPAT3Q53EU6 434 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 SPANXN4Q5MJ08 99 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 TNFAIP8L2Q6P589 184 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms