RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HSPB2A8KAH6 182 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 C5orf58C9J3I9 102 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 EIF1AYO14602 144 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 THBS1P07996 1170 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 SESN3P58005 492 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 TFF3Q07654 80 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 CYLC2Q14093 348 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 SCARB2Q14108 478 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 HSPB2Q16082 182 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 MMEL1Q495T6 779 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 RNF220Q5VTB9 566 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 REEP3Q6NUK4 255 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 GRAMD2AQ8IUY3 354 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 CLIP4Q8N3C7 705 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 RELL2Q8NC24 303 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 FIG4Q92562 907 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 WNT2BQ93097 391 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 LRRC58Q96CX6 371 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 PINK1Q9BXM7 581 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 MYLK2Q9H1R3 596 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 KAT8Q9H7Z6 458 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 ACER3Q9NUN7 267 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 CENPEQ02224 2701 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 MED12LQ86YW9 2145 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 TNFSF11O14788 317 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 ADAMDEC1O15204 470 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 CCDC22O60826 627 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 IL2RAP01589 272 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 PABPC4LP0CB38 370 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 ETS2P15036 469 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 SFTPDP35247 375 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 GZMMP51124 257 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 EEFSECP57772 596 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 FOXF2Q12947 444 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 RABL3Q5HYI8 236 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 NANOGP8Q6NSW7 305 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 PLEKHM3Q6ZWE6 761 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 NET1Q7Z628 596 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 CPLX4Q7Z7G2 160 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 COMTD1Q86VU5 262 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 ZZZ3Q8IYH5 903 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 LILRA2Q8N149 483 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 OR10D3Q8NH80 312 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 RCN3Q96D15 328 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 KLHL15Q96M94 604 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 SPATA9Q9BWV2 254 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 NANOGQ9H9S0 305 aa16.39■□□□□ 0.21
PDLIM7-216ENST00000506537 SLC22A20A6NK97 555 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 RCBTB2O95199 551 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 GKN3PP0CG01 181 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 COX4I1P13073 169 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 ME2P23368 584 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 ACAA2P42765 397 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 EIF1AXP47813 144 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 SLC6A8P48029 635 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 MERTKQ12866 999 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 EPS8Q12929 822 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 SELENBP1Q13228 472 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 LARS2Q15031 903 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 PON3Q15166 354 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 CYP51A1Q16850 503 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 ZNF311Q5JNZ3 666 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 ESPNLQ6ZVH7 1005 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 GCNT2Q8N0V5 402 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 ATP6V1C2Q8NEY4 427 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 OR2V1Q8NHB1 315 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 ZNF563Q8TA94 476 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 FNDC9Q8TBE3 224 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 TM9SF2Q99805 663 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 COQ10BQ9H8M1 238 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 NPDC1Q9NQX5 325 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 IFT52Q9Y366 437 aa16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 INTS1Q8N201 2190 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-216ENST00000506537 HCFC1P51610 2035 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 CFAP73A6NFT4 308 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 FAAHO00519 579 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 CXCL13O43927 109 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 GCM2O75603 506 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 AQP8O94778 261 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 TMIGD3P0DMS9 266 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 PRG2P13727 222 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 BMP5P22003 454 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 SLC6A2P23975 617 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 AQP1P29972 269 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 IDH2P48735 452 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 AGFG1P52594 562 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 PCBP3P57721 371 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 RPS3AP61247 264 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 ZNF787Q6DD87 383 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 CHMP1BQ7LBR1 199 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 PIGWQ7Z7B1 504 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 C11orf65Q8NCR3 313 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 HIPK4Q8NE63 616 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 OR8J3Q8NGG0 315 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 OR10A6Q8NH74 314 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 RP9Q8TA86 221 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 TMEM234Q8WY98 164 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 INTS12Q96CB8 462 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 SRXN1Q9BYN0 137 aa16.37■□□□□ 0.21
PDLIM7-216ENST00000506537 CTPS2Q9NRF8 586 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms