RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CCDC137Q6PK04 289 aaKnown RBP2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 UNQ9370/PRO34162Q6UXP9 181 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 TPRA1Q86W33 373 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 SLC38A6Q8IZM9 456 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 OR52I1Q8NGK6 324 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 RAET1EQ8TD07 263 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 ELSPBP1Q96BH3 223 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 TBC1D31Q96DN5 1066 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 PGLYRP4Q96LB8 373 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 LINC00167Q96N53 147 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 TPPP3Q9BW30 176 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 HES7Q9BYE0 225 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 NAT10Q9H0A0 1025 aaKnown RBP2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF385DQ9H6B1 395 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 NARFLQ9H6Q4 476 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 AIPL1Q9NZN9 384 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 TMOD2Q9NZR1 351 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 DCDC2Q9UHG0 476 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 ERVW-1Q9UQF0 538 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 MAD1L1Q9Y6D9 718 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 A0A0G2JRQ6 117 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 VSTM2BA6NLU5 285 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 A8MUI8 341 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 E7ESA3 106 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 G3V4G9 280 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 PRKYO43930 277 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 PCCBP05166 539 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 HEXBP07686 556 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 POLR2EP19388 210 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 ATP6V1C1P21283 382 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 PAX7P23759 505 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 CD1BP29016 333 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 CA8P35219 290 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 PRKXP51817 358 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF133P52736 654 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 AP3M2P53677 418 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 APOC4P55056 127 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 CSTF1Q05048 431 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 CCDC173Q0VFZ6 552 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 SELPLGQ14242 412 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 CAPRIN1Q14444 709 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 SYPL1Q16563 259 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 FAM71F2Q6NXP2 309 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 KCNIP4Q6PIL6 250 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 IGFL2Q6UWQ7 119 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 ARCQ7LC44 396 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 SVOPLQ8N434 492 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 CCDC71LQ8N9Z2 235 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 DCAF4L2Q8NA75 395 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 TCTEX1D2Q8WW35 142 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 OR1E3Q8WZA6 343 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 DTNBP1Q96EV8 351 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 RIT2Q99578 217 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 ARHGDIGQ99819 225 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 KLHDC3Q9BQ90 382 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 EBF4Q9BQW3 602 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 SPATA16Q9BXB7 569 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 MAGT1Q9H0U3 335 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 RHBGQ9H310 441 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 ZDHHC11Q9H8X9 412 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 ELOVL3Q9HB03 270 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 FARSBQ9NSD9 589 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 NEU3Q9UQ49 428 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 OR10H1Q9Y4A9 318 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 UGT2A1Q9Y4X1 527 aa2.7□□□□□ -1.98
TOPBP1-204ENST00000505804 CLSPNQ9HAW4 1339 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 LTBP1Q14766 1721 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 CDC42BPBQ9Y5S2 1711 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 RS1O15537 224 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 PEX11AO75192 247 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 BCAS1O75363 584 aaPredicted RBP2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 IDH1O75874 414 aaKnown RBP2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 ALOX5P09917 674 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 H2BFMP0C1H6 154 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 TSPY4P0CV99 314 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 TSPY10P0CW01 314 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 UQCRC2P22695 453 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 PLK1P53350 603 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 BIDP55957 195 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 CSNK1G2P78368 415 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 CHRNB3Q05901 458 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 TATDN3Q17R31 274 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 TRIM16LQ309B1 348 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 TP53I3Q53FA7 332 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 PYHIN1Q6K0P9 492 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 ACOT7LQ6ZUV0 252 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 ARMCX2Q7L311 632 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 VRK2Q86Y07 508 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 ZDHHC21Q8IVQ6 265 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 CLDN19Q8N6F1 224 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 ATP6V0D2Q8N8Y2 350 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF740Q8NDX6 193 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 STXBP6Q8NFX7 210 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 OR10A7Q8NGE5 316 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 OR56B4Q8NH76 319 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 FAM3CQ92520 227 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 GAL3ST1Q99999 423 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 NANOGQ9H9S0 305 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 SH2D2AQ9NP31 389 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 SIGLEC8Q9NYZ4 499 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms