RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 SFRP4Q6FHJ7 346 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 BTN2A1Q7KYR7 527 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 ASPGQ86U10 573 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 OR2L3Q8NG85 312 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 OR11G2Q8NGC1 345 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 OR52E1Q8NGJ3 308 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 OR51A7Q8NH64 312 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 TMEM239Q8WW34 195 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 SDF2Q99470 211 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 IFT27Q9BW83 186 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 METTL17Q9H7H0 456 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 BRD7Q9NPI1 651 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 SCML1Q9UN30 329 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 SIGLEC7Q9Y286 467 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 SLC27A6Q9Y2P4 619 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 RNF215Q9Y6U7 377 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 EDDM13A0A1B0GTR0 161 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 PRR23D1E9PI22 279 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 SLC9A3R1O14745 358 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 ASGR2P07307 311 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 PRR23D2P0DMB1 279 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 NDUFS1P28331 727 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 SNTB2Q13425 540 aaKnown RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 TP53I3Q53FA7 332 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 SLC39A5Q6ZMH5 540 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 LSMEM1Q8N8F7 131 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 OR2T35Q8NGX2 323 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 DACT3Q96B18 629 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 OR6C2Q9NZP2 312 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 NUP50Q9UKX7 468 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 AK6Q9Y3D8 172 aaKnown RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 STON1Q9Y6Q2 735 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF780BQ9Y6R6 833 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 MUC22E2RYF6 1773 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 TFP02787 698 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ACRP10323 421 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 PPM1AP35813 382 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ARHGEF6Q15052 776 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 TRMT12Q53H54 448 aaKnown RBP10.99□□□□□ -0.65
UBE3D-206ENST00000505226 CLLU1Q5K131 121 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 KANSL1Q7Z3B3 1105 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 LUZP2Q86TE4 346 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 CMIPQ8IY22 773 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 MS4A15Q8N5U1 240 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 TTLQ8NG68 377 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 POF1BQ8WVV4 589 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 OTUB2Q96DC9 234 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 NXPE2Q96DL1 559 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 DERL3Q96Q80 235 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 USP36Q9P275 1121 aaKnown RBP10.99□□□□□ -0.65
UBE3D-206ENST00000505226 NPTNQ9Y639 398 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 LTBP2Q14767 1821 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 TRAPPC13A5PLN9 417 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 PRR23AA6NEV1 266 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 SSNA1O43805 119 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 BMP7P18075 431 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 MAGEB1P43366 347 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 NRG3P56975 720 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 RPL6Q02878 288 aaKnown RBP10.99□□□□□ -0.65
UBE3D-206ENST00000505226 HSF2Q03933 536 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 FHL1Q13642 323 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ZSWIM7Q19AV6 140 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 MRPL2Q5T653 305 aaKnown RBP10.99□□□□□ -0.65
UBE3D-206ENST00000505226 HACD4Q5VWC8 232 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 RTL4Q6ZR62 310 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 SLC44A3Q8N4M1 653 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 OR52L1Q8NGH7 329 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 OR2L8Q8NGY9 312 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 GFI1Q99684 422 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 RBCK1Q9BYM8 510 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF436Q9C0F3 470 aaPredicted RBP10.99□□□□□ -0.65
UBE3D-206ENST00000505226 C20orf85Q9H1P6 137 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ZCCHC4Q9H5U6 513 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 NPFFR2Q9Y5X5 522 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 A0A087WV48 116 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 SLC22A31A6NKX4 558 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 PPP1R3DO95685 299 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 CSF2RAP15509 400 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 UGT2B7P16662 529 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 CD53P19397 219 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 DRD3P35462 400 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 GDNFP39905 211 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 DUSP8Q13202 625 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 FGL2Q14314 439 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ARHGAP11BQ3KRB8 267 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 GARNL3Q5VVW2 1013 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 CMTM4Q8IZR5 234 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 OR51L1Q8NGJ5 315 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 RPLP0P6Q8NHW5 317 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ZNRF4Q8WWF5 429 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 PIGKQ92643 395 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 BPIFA2Q96DR5 249 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 TBX21Q9UL17 535 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 PPIEQ9UNP9 301 aaKnown RBP10.99□□□□□ -0.65
UBE3D-206ENST00000505226 SATB2Q9UPW6 733 aa10.99□□□□□ -0.65
UBE3D-206ENST00000505226 ADAM11O75078 769 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 PTP4A3O75365 173 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 RRASP10301 218 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms