RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SSX8Q7RTT4 187 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 SPATA19Q7Z5L4 167 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 P2RY8Q86VZ1 359 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 SPATA4Q8NEY3 305 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 OR52E4Q8NGH9 312 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 OR6Y1Q8NGX8 325 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 CEP70Q8NHQ1 597 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 CLHC1Q8NHS4 586 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 CDS1Q92903 461 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 APH1AQ96BI3 265 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 PPCDCQ96CD2 204 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 C16orf58Q96GQ5 468 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 EGLN2Q96KS0 407 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 PAFAH2Q99487 392 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 SOX7Q9BT81 388 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 C1QTNF3Q9BXJ4 246 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 FKRPQ9H9S5 495 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 MID1IP1Q9NPA3 183 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 ZCCHC3Q9NUD5 404 aaKnown RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 ASB6Q9NWX5 421 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 NINJ2Q9NZG7 142 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 EMC3Q9P0I2 261 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 NOSIPQ9Y314 301 aaKnown RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 GOLGA8QA0A0J9YX86 632 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 A0A1W2PQD3 144 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 GOLGA8OA6NCC3 632 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF724A8MTY0 619 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 GOLGA8NF8WBI6 632 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 H3BNH8 94 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 GOLGA8RI6L899 631 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 NDUFS8O00217 210 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ST8SIA5O15466 376 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 VENTXO95231 258 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 SLU7O95391 586 aaKnown RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF23P17027 643 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ATP5F1P24539 256 aaPredicted RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 APEX1P27695 318 aaKnown RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 APOBEC3AP31941 199 aaPredicted RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 SERPINB4P48594 390 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 DIO1P49895 249 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 SERPINB9P50453 376 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 PKNOX1P55347 436 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 SUMO3P55854 103 aaPredicted RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 FAM174BQ3ZCQ3 159 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF385BQ569K4 471 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 NOXRED1Q6NXP6 359 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 C3orf33Q6P1S2 294 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 VHLLQ6RSH7 139 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 CASP12Q6UXS9 341 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 IKBIPQ70UQ0 350 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 LSRQ86X29 649 aaPredicted RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 TMEM151AQ8N4L1 468 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 CCNYL1Q8N7R7 359 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF527Q8NB42 609 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 TOR1AIP2Q8NFQ8 470 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF75CPQ92670 426 aaPredicted RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 HOXB13Q92826 284 aaPredicted RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF524Q96C55 264 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 GIMAP5Q96F15 307 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 MRGPRX4Q96LA9 322 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 TSSK3Q96PN8 268 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 BTBD2Q9BX70 525 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 IQCGQ9H095 443 aaKnown RBP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 SIRT5Q9NXA8 310 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 TAS2R16Q9NYV7 291 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 TAS2R7Q9NYW3 318 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 TMEM216Q9P0N5 145 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 SH3BP4Q9P0V3 963 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 ICAM5Q9UMF0 924 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 MOKQ9UQ07 419 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 STK38LQ9Y2H1 464 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 PTGDR2Q9Y5Y4 395 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 PLCE1Q9P212 2302 aa6.04□□□□□ -1.44
NPIPB3-203ENST00000504841 LOC390937A0A1W2PQ73 354 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 SULT2B1O00204 365 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 KLF11O14901 512 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 SEC22BO75396 215 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 SKAP2O75563 359 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 RSL1D1O76021 490 aaKnown RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 ITGA5P08648 1049 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 IFI6P09912 130 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 UBL4AP11441 157 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 CDH2P19022 906 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 LCN1P31025 176 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 IL2RGP31785 369 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 MAP3K8P41279 467 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 PRKAA2P54646 552 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 SLC25A3Q00325 362 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 MERTKQ12866 999 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 CCNIQ14094 377 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 GABRA6Q16445 453 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 MST1LQ2TV78 715 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 SPDYE7PQ495Y7 208 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 TIGD2Q4W5G0 525 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 KLHL26Q53HC5 615 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 ABLIM2Q6H8Q1 611 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms