RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PRDM4Q9UKN5 801 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 ANGPT4Q9Y264 503 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 FREM1Q5H8C1 2179 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 ALPK2Q86TB3 2170 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 INTS1Q8N201 2190 aaKnown RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 PCNX1Q96RV3 2341 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 MYO18BQ8IUG5 2567 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ZC3H12DA2A288 527 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 AQP12BA6NM10 295 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 B8ZZF3 427 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 FTCDNL1E5RQL4 147 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 H0YC42 278 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 J3KTA2 159 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 HCRTR2O43614 444 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 SUSD5O60279 629 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 FMO6PO60774 539 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 SERPINB7O75635 380 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PDE9AO76083 593 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 TSPAN19P0C672 248 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF708P17019 499 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF17P17021 662 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF24P17028 368 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 DPP4P27487 766 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ADH6P28332 368 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 SUCLG1P53597 346 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 TPD52P55327 224 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ACTR3P61158 418 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PPIAP62937 165 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 RPP38P78345 283 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PRR20EP86478 221 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PRR20CP86479 221 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PRR20DP86480 221 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PRR20BP86481 221 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PRR20AP86496 221 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 HSF1Q00613 529 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 FOXF1Q12946 379 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 NFATC3Q12968 1075 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 FHL1Q13642 323 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 GANABQ14697 944 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 LARS2Q15031 903 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 QPRTQ15274 297 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ZSWIM7Q19AV6 140 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 LRRC23Q53EV4 343 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 WIPI1Q5MNZ9 446 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 RTL6Q6ICC9 239 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 NHLRC1Q6VVB1 395 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 CYP2R1Q6VVX0 501 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 Q6ZPB1 254 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 SEM1Q6ZVN7 128 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PLEKHM3Q6ZWE6 761 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ATG4DQ86TL0 474 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 YRDCQ86U90 279 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 AQP12AQ8IXF9 295 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 EID3Q8N140 333 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 TEX19Q8NA77 164 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 NEIL3Q8TAT5 605 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ADAMTS16Q8TE57 1224 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 CANT1Q8WVQ1 401 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ST8SIA1Q92185 356 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 SLC38A4Q969I6 547 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 CCDC124Q96CT7 223 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 HSH2DQ96JZ2 352 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 MRGPRX4Q96LA9 322 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF607Q96SK3 696 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 TIMP4Q99727 224 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 UGT2B28Q9BY64 529 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PRDM14Q9GZV8 571 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 TSPAN10Q9H1Z9 355 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 SLC6A15Q9H2J7 730 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 MUC13Q9H3R2 512 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 DENND2DQ9H6A0 471 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 COQ10BQ9H8M1 238 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 NTN4Q9HB63 628 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ACER3Q9NUN7 267 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 VNN3Q9NY84 501 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 PPP4R1LQ9P1A2 415 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 TNFRSF10DQ9UBN6 386 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 TESQ9UGI8 421 aaKnown RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 OSGIN1Q9UJX0 560 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 BOKQ9UMX3 212 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-208ENST00000504788 VDAC3Q9Y277 283 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF337Q9Y3M9 751 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 ESPL1Q14674 2120 aa4.46□□□□□ -1.7
LMNB1-208ENST00000504788 GCN1Q92616 2671 aaKnown RBP4.45□□□□□ -1.7
LMNB1-208ENST00000504788 A0A087WUJ7 227 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 A0A087WZY1 265 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 CFAP73A6NFT4 308 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 FAM166BA8MTA8 275 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 C5orf58C9J3I9 102 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 H3BNX3 289 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 AQP7O14520 342 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 ADAMDEC1O15204 470 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 HCN1O60741 890 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 CPN1P15169 458 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 BMP7P18075 431 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 KLK2P20151 261 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 CHMP24386 653 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 GDF1P27539 372 aa4.45□□□□□ -1.7
LMNB1-208ENST00000504788 SLC1A3P43003 542 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms