RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 P2RX1P51575 399 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 CTBP2P56545 445 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 SMIM11AP58511 58 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 EGR4Q05215 589 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 COL28A1Q2UY09 1125 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 ACER2Q5QJU3 275 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 JMJD6Q6NYC1 403 aaPredicted RBP9.46□□□□□ -0.9
TPM3-217ENST00000504663 OPN5Q6U736 354 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 UGT2A3Q6UWM9 527 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 MDGA2Q7Z553 956 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 GALNT5Q7Z7M9 940 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 MISPQ8IVT2 679 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 NRMQ8IXM6 262 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 BEST3Q8N1M1 668 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 WDSUB1Q8N9V3 476 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 ATG16L2Q8NAA4 619 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 OR8D4Q8NGM9 314 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 OR5W2Q8NH69 310 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 SLC38A4Q969I6 547 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 SDCCAG3Q96C92 435 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 TMCO6Q96DC7 493 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 THOC3Q96J01 351 aaKnown RBP9.46□□□□□ -0.9
TPM3-217ENST00000504663 IP6K3Q96PC2 410 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 SECISBP2Q96T21 854 aaKnown RBP9.46□□□□□ -0.9
TPM3-217ENST00000504663 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 SCNM1Q9BWG6 230 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 ANGPTL4Q9BY76 406 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 TBL1XR1Q9BZK7 514 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 PLA2G12AQ9BZM1 189 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 DSN1Q9H410 356 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 CPNE5Q9HCH3 593 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 NDRG4Q9ULP0 352 aaKnown RBP9.46□□□□□ -0.9
TPM3-217ENST00000504663 MGAT4BQ9UQ53 548 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 POFUT2Q9Y2G5 429 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 WIF1Q9Y5W5 379 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 PIEZO1Q92508 2521 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 A0A087WUJ7 227 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 ANKUB1A6NFN9 424 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 HCRTR2O43614 444 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 OR10H3O60404 316 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 FZD7O75084 574 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 LINGO3P0C6S8 592 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 FPR3P25089 353 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 RBM34P42696 430 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 IDH2P48735 452 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 MYBPC1Q00872 1141 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 ALDH6A1Q02252 535 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 PRKCDQ05655 676 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 CDC20Q12834 499 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 FOXD4Q12950 439 aaPredicted RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 NPRL3Q12980 569 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 AIMP2Q13155 320 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 RFX4Q33E94 735 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 SLC25A53Q5H9E4 307 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 PRAMEF20Q5VT98 475 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 ZNF691Q5VV52 312 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 WBP2NLQ6ICG8 309 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 ULK3Q6PHR2 472 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 IL20RBQ6UXL0 311 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 SLC46A3Q7Z3Q1 461 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 DND1Q8IYX4 353 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 CADM2Q8N3J6 435 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 DHRSXQ8N5I4 330 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 OR2M3Q8NG83 312 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 B4GALNT2Q8NHY0 566 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 POC1BQ8TC44 478 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 DUSP19Q8WTR2 217 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 TMEM239Q8WW34 195 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 ASB15Q8WXK1 588 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 GATA6Q92908 595 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 FGF11Q92914 225 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 GTPBP3Q969Y2 492 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 KIAA1143Q96AT1 154 aaPredicted RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 FAM46AQ96IP4 442 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 C12orf10Q9HB07 376 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 TMEM27Q9HBJ8 222 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 PAPOLBQ9NRJ5 636 aaKnown RBP9.45□□□□□ -0.9
TPM3-217ENST00000504663 KRT84Q9NSB2 600 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 TMCC3Q9ULS5 477 aa9.45□□□□□ -0.9
TPM3-217ENST00000504663 TNRC6AQ8NDV7 1962 aaKnown RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 LOC100130705A0A1B0GUX0 176 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 LRRC3CA6NJW4 275 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 ZAR1LA6NP61 321 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 H3BNH8 94 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 SNPHO15079 494 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 NPIPB7O75200 414 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 TRIM3O75382 744 aaPredicted RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 NEURL1O76050 574 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 POU2F1P14859 743 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 HPGDP15428 266 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 PRKCAP17252 672 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 GABRB1P18505 474 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 FUT1P19526 365 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 ENDOUP21128 410 aaKnown RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 SDHBP21912 280 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 CHMP24386 653 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 SLC1A3P43003 542 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 GPR4P46093 362 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 SLC6A8P48029 635 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms