RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 UBQLN3Q9H347 655 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TRIM36Q9NQ86 728 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SIRT3Q9NTG7 399 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 GNG8Q9UK08 70 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 LOC285556D6RIA3 1793 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PYCARD-AS1I3L0S3 204 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 DOK2O60496 412 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 C1orf105O95561 183 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 C8AP07357 584 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 S100A11P31949 105 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 RPS27P42677 84 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CCR9P51686 369 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 POLR2LP62875 67 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PLA2G7Q13093 441 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PGGHGQ32M88 737 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 AADACL4Q5VUY2 407 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 NXPE4Q6UWF7 544 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 GSG1LQ6UXU4 331 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ANKRD53Q8N9V6 530 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 BVESQ8NE79 360 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 OR13C2Q8NGS9 318 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 NEURL3Q96EH8 262 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CHFRQ96EP1 664 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 WBP1Q96G27 269 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF75AQ96N20 296 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 NDC1Q9BTX1 674 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 VN1R3Q9BXE9 311 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TEX12Q9BXU0 123 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CHST6Q9GZX3 395 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZMAT3Q9HA38 289 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ACSL5Q9ULC5 683 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PLCL2Q9UPR0 1127 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF175Q9Y473 711 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 WASH3PC4AMC7 463 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 DISC1C4P0D8 188 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 TMEM189-UBE2V1I3L0A0 370 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 DNASE2O00115 360 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 NPC1O15118 1278 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 FLRT2O43155 660 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 CXCL14O95715 111 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 TYRP14679 529 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 ACADLP28330 430 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 TEAD1P28347 426 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 MC3RP41968 323 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 CBX5P45973 191 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 CAPZA2P47755 286 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PTH2RP49190 550 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 H2BFSP57053 126 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 ST8SIA6P61647 398 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PLPP4Q5VZY2 271 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 OR7E24Q6IFN5 339 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 UNQ6126/PRO20091Q6UXV3 157 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 THSD4Q6ZMP0 1018 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF761Q86XN6 746 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 SLITRK4Q8IW52 837 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF485Q8NCK3 441 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 BPIFCQ8NFQ6 507 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 OR2T33Q8NG76 320 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 OR6K6Q8NGW6 343 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 GOT1L1Q8NHS2 421 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 GNPDA2Q8TDQ7 276 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PTP4A1Q93096 173 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 MRPS24Q96EL2 167 aaKnown RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 TSNAXQ99598 290 aaKnown RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 UQCC2Q9BRT2 126 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 MFFQ9GZY8 342 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 KLHL31Q9H511 634 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 MYNNQ9NPC7 610 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 TAS2R10Q9NYW0 307 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 ACTR10Q9NZ32 417 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PIPOXQ9P0Z9 390 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PCYT1BQ9Y5K3 369 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 AUP1Q9Y679 476 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 F5P12259 2224 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 A0A1B0GTH9 108 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 A8MVJ9 347 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 NRG2O14511 850 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 CASC3O15234 703 aaKnown RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 CREBL2O60519 120 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 RPLP2P05387 115 aaKnown RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 MPC1LP0DKB6 136 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 BMP7P18075 431 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PSMA3P25788 255 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 MTNR1BP49286 362 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 SEC61A1P61619 476 aaKnown RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 GUCA2AQ02747 115 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 TGM3Q08188 693 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PRAMEF14Q5SWL7 426 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PDSS1Q5T2R2 415 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 ASTLQ6HA08 431 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 KIAA1211LQ6NV74 962 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 HAGHLQ6PII5 290 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-208ENST00000504387 SLC44A3Q8N4M1 653 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 CLRN3Q8NCR9 226 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 OR4K13Q8NH42 304 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 OR56A3Q8NH54 315 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 DUSP19Q8WTR2 217 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 MARVELD3Q96A59 401 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PRRC1Q96M27 445 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms