RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OIT3Q8WWZ8 545 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ST8SIA1Q92185 356 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 RAB8BQ92930 207 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ROPN1LQ96C74 230 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 OR52E6Q96RD3 313 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 PANX1Q96RD7 426 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 PIP5K1AQ99755 562 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 SLC35A5Q9BS91 424 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 TACO1Q9BSH4 297 aaKnown RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 OR10A4Q9H209 315 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 MTHFD2LQ9H903 347 aaPredicted RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 UBTD1Q9HAC8 227 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 NKIRAS1Q9NYS0 192 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 MARCOQ9UEW3 520 aaPredicted RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 BTNL2Q9UIR0 455 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 KCNE5Q9UJ90 142 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 SLC35A3Q9Y2D2 325 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 WDR45Q9Y484 360 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ARID1AO14497 2285 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 PCNX3Q9H6A9 2034 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 FN1P02751 2386 aaKnown RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 TMEM120BA0PK00 339 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 CCDC154A6NI56 674 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 ESPNB1AK53 854 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 E9PBE3 544 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 KLF4O43474 513 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 DNAJA2O60884 412 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 ERLIN1O75477 346 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 KITP10721 976 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 RYKP34925 604 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 SLC18A1P54219 525 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 NR1H2P55055 460 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 CSNK2A1P68400 391 aaPredicted RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 KCNJ10P78508 379 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 TXNL4AP83876 142 aaKnown RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 MERTKQ12866 999 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 P2RY6Q15077 328 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 SAXO2Q658L1 398 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 NXNQ6DKJ4 435 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 TYW3Q6IPR3 259 aaKnown RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 ALKBH2Q6NS38 261 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 TNFAIP8L2Q6P589 184 aaPredicted RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 C20orf204Q6ZNR8 217 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 PLEKHM3Q6ZWE6 761 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 CXorf67Q86X51 503 aaPredicted RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 RNF128Q8TEB7 428 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 ABHD3Q8WU67 409 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 HSD17B8Q92506 261 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 ZG16BQ96DA0 208 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 NEURL3Q96EH8 262 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 CCDC115Q96NT0 180 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 OR5B2Q96R09 309 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 SRXN1Q9BYN0 137 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 ACTR6Q9GZN1 396 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 ZNF350Q9GZX5 532 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 SAP130Q9H0E3 1048 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 SERHL2Q9H4I8 314 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 WDR55Q9H6Y2 383 aaPredicted RBP10.65□□□□□ -0.7
MED28-203ENST00000503945 MANSC1Q9H8J5 431 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 NGBQ9NPG2 151 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 ACER3Q9NUN7 267 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 KLHL9Q9P2J3 617 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 KLHL13Q9P2N7 655 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 LIPT1Q9Y234 373 aa10.65□□□□□ -0.7
MED28-203ENST00000503945 RTTNQ86VV8 2226 aa10.65□□□□□ -0.71
MED28-203ENST00000503945 NSD1Q96L73 2696 aaPredicted RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 A0A1W2PNR3 127 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 SULT2B1O00204 365 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 ETV2O00321 342 aaPredicted RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 SIAH2O43255 324 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 SLC22A3O75751 556 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 LY6G6DO95868 133 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 ADAP00813 363 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 IL6P05231 212 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 PGRP06401 933 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 THBDP07204 575 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 TFPIP10646 304 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 PSMB1P20618 241 aaKnown RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 CCKARP32238 428 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 PGM1P36871 562 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 KHKP50053 298 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 WDR4P57081 412 aaKnown RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 HPCAP84074 193 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 RASGEF1BQ0VAM2 473 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 SKP2Q13309 424 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 GNA13Q14344 377 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 MAPK14Q16539 360 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 SFRP5Q5T4F7 317 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 C3orf33Q6P1S2 294 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 TMPPEQ6ZT21 453 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 OLIG3Q7RTU3 272 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 NUFIP2Q7Z417 695 aaKnown RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 PRIMA1Q86XR5 153 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 RNF130Q86XS8 419 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 WFDC8Q8IUA0 241 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 LRRC75A-AS1Q8N1F1 130 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 ZNF619Q8N2I2 560 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms