RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CCND3P30281 292 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 MAP2K4P45985 399 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 RGS8P57771 180 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 TAS2R38P59533 333 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 HIST1H3AP68431 136 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PDZK1IP1Q13113 114 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 CLN3Q13286 438 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PPIGQ13427 754 aaKnown RBP eCLIP2.59□□□□□ -2
NEDD4-204ENST00000503468 GRIN2CQ14957 1233 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 HEPACAMQ14CZ8 416 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 ARSIQ5FYB1 569 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 RAET1GQ6H3X3 334 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 C11orf88Q6PI97 169 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PET117Q6UWS5 81 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 HIST2H3AQ71DI3 136 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 DPPA4Q7L190 304 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 SMRP1Q8NCR6 262 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 OR10K1Q8NGX5 313 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 REPS1Q96D71 796 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 SLC41A2Q96JW4 573 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PANX1Q96RD7 426 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 KATNB1Q9BVA0 655 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PBDC1Q9BVG4 233 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 BEX2Q9BXY8 128 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 HHATLQ9HCP6 504 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 SRA1Q9HD15 236 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 TXNL4BQ9NX01 149 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 VAPAQ9P0L0 249 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 COMMD3Q9UBI1 195 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 U3KQA8 63 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 A0A087WZ62 844 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ACOT7O00154 380 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 AKR7A2O43488 359 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PTHP01270 115 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 OSMP13725 252 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LAP3P28838 519 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PPP2R1BP30154 601 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SERPINF1P36955 418 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SOX3P41225 446 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 RFX3P48380 749 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 WDR5P61964 334 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 DLK1P80370 383 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DCDP81605 110 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 ACSM2AQ08AH3 577 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SERTAD2Q14140 314 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 POU4F3Q15319 338 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MPEG1Q2M385 716 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FAM174BQ3ZCQ3 159 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TIGD5Q53EQ6 642 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 Q5BKY6 102 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ACSM2BQ68CK6 577 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FAM199XQ6PEV8 388 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 CRTC1Q6UUV9 634 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CHMP1BQ7LBR1 199 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SSX6Q7RTT6 188 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DCXRQ7Z4W1 244 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MILR1Q7Z6M3 343 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GPSM1Q86YR5 675 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CMIPQ8IY22 773 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 THEM5Q8N1Q8 247 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 KLHL36Q8N4N3 616 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TRAM1L1Q8N609 369 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ARL14EPQ8N8R7 260 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 PAQR8Q8TEZ7 354 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PIGKQ92643 395 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 S100PBPQ96BU1 408 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MALSU1Q96EH3 234 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LRRC46Q96FV0 321 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 OSMRQ99650 979 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FAIM2Q9BWQ8 316 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MMP28Q9H239 520 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ALG9Q9H6U8 611 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NOX3Q9HBY0 568 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ZBTB20Q9HC78 741 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 ZFP64Q9NPA5 681 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DLL4Q9NR61 685 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GSN-AS1Q9NRJ2 163 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TMEM184CQ9NVA4 438 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TAS2R10Q9NYW0 307 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 H2AFY2Q9P0M6 372 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 EVLQ9UI08 416 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 ZNF107Q9UII5 783 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 TSPAN16Q9UKR8 245 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TMEM184BQ9Y519 407 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 EPG5Q9HCE0 2579 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PIGBOS1A0A0B4J2F0 54 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 A0A1W2PPV9 198 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TRABD2BA6NFA1 517 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NEMP2A6NFY4 417 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TRDCB7Z8K6 153 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 J3KR12 359 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DNASE2O00115 360 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 MT-CYBP00156 380 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 UCHL1P09936 223 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 IL11P20809 199 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 HTR2CP28335 458 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MAT2AP31153 395 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 SMSP52788 366 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ACTBP60709 375 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ACTG1P63261 375 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms