RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ZNF107Q9UII5 783 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 FBXW2Q9UKT8 454 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 SCML2Q9UQR0 700 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 THADAQ6YHU6 1953 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 KNL1Q8NG31 2342 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 MYOFQ9NZM1 2061 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 IGF2RP11717 2491 aa4.4□□□□□ -1.7
NIPBL-203ENST00000503274 PCNX2A6NKB5 2137 aa4.4□□□□□ -1.7
NIPBL-203ENST00000503274 RNF212BA8MTL3 300 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 SGK1O00141 431 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 TPBGLP0DKB5 382 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 CCDC130P13994 396 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 GNSP15586 552 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 CSRP1P21291 193 aaKnown RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 ADORA2BP29275 332 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 P2RY2P41231 377 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 PPP1R2P41236 205 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 GCLMP48507 274 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 NOVA1P51513 510 aaKnown RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 NDUFA8P51970 172 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 ADARP55265 1226 aaKnown RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 KDSRQ06136 332 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 GFPT1Q06210 699 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 INCA1Q0VD86 236 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 MORF4L2Q15014 288 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 P2RY14Q15391 338 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF674Q2M3X9 581 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 PAQR9Q6ZVX9 377 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 TMEM25Q86YD3 366 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 BBS7Q8IWZ6 715 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 C12orf29Q8N999 325 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 FBXL13Q8NEE6 735 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 OR4L1Q8NH43 312 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 RNF139Q8WU17 664 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 BCL2L2Q92843 193 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 PNPLA2Q96AD5 504 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 SPAG8Q99932 426 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 APOL2Q9BQE5 337 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 DUSP16Q9BY84 665 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 TSPYL1Q9H0U9 437 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 FAM49BQ9NUQ9 324 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 MRTO4Q9UKD2 239 aaKnown RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 KIAA1257Q9ULG3 409 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 FOXA2Q9Y261 457 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 OBSL1O75147 1896 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 CACNA1EQ15878 2313 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 PTPRDP23468 1912 aa4.4□□□□□ -1.71
NIPBL-203ENST00000503274 TP53BP1Q12888 1972 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 ASCC3Q8N3C0 2202 aaKnown RBP4.4□□□□□ -1.71
NIPBL-203ENST00000503274 ATRXP46100 2492 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 NBEAQ8NFP9 2946 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 ZFYVE26Q68DK2 2539 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 HELZP42694 1942 aaKnown RBP4.39□□□□□ -1.71
NIPBL-203ENST00000503274 SH3PXD2BA1X283 911 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 CACNG3O60359 315 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 GMNNO75496 209 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 TRIM16O95361 564 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 TXNDC12O95881 172 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 SERPINF2P08697 491 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 CCDC159P0C7I6 412 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 SMSP52788 366 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 SGCBQ16585 318 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 N4BP2L1Q5TBK1 243 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-203ENST00000503274 SPOPLQ6IQ16 392 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 BAIAP2L2Q6UXY1 529 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 TPGS1Q6ZTW0 290 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 CLEC20AQ6ZU45 233 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 FBXW8Q8N3Y1 598 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF557Q8N988 423 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-203ENST00000503274 CHDHQ8NE62 594 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-203ENST00000503274 LPCAT1Q8NF37 534 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 OR6M1Q8NGM8 313 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 OR6T1Q8NGN1 323 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 OR4F5Q8NH21 305 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 FLVCR1-AS1Q8TAF5 88 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 RLN3Q8WXF3 142 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 GLYATL1Q969I3 302 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 NTNG2Q96CW9 530 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 CXorf58Q96LI9 332 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 GSDMAQ96QA5 445 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 DDX28Q9NUL7 540 aaKnown RBP4.39□□□□□ -1.71
NIPBL-203ENST00000503274 RAB20Q9NX57 234 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 EIF3KQ9UBQ5 218 aaKnown RBP4.39□□□□□ -1.71
NIPBL-203ENST00000503274 PLA2G4CQ9UP65 541 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 NUP205Q92621 2012 aa4.39□□□□□ -1.71
NIPBL-203ENST00000503274 KNTC1P50748 2209 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 CABIN1Q9Y6J0 2220 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 ACACAQ13085 2346 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 FREM2Q5SZK8 3169 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 ASPMQ8IZT6 3477 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 MEI4A8MW99 385 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 E2F3O00716 465 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 IGKV3-15P01624 115 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 FCGR3AP08637 254 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 BCKDHBP21953 392 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 PPP2R1BP30154 601 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 KIAA1024LP59773 190 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 YWHAGP61981 247 aaKnown RBP eCLIP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms