RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 DPYSL3Q14195 570 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 NDUFA9Q16795 377 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 KLHL22Q53GT1 634 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 TEX44Q53QW1 395 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 NHLRC3Q5JS37 347 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF57Q68EA5 555 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 LEMD1Q68G75 181 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 PVRIGQ6DKI7 326 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 NANOGNBQ7Z5D8 188 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 SLC22A9Q8IVM8 553 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 SLC22A18ASQ8N1D0 253 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 Q8N9G6 341 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 RPRD1AQ96P16 312 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR5B2Q96R09 309 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 ADNPQ9H2P0 1102 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 SGK2Q9HBY8 427 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 TIGARQ9NQ88 270 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 PRODH2Q9UF12 536 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 MEMO1Q9Y316 297 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 TDRD15B5MCY1 1934 aaKnown RBP4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 CDK12Q9NYV4 1490 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 TECPR2O15040 1411 aa4.21□□□□□ -1.73
HMGB1P3-201ENST00000502802 ABCA3Q99758 1704 aa4.21□□□□□ -1.73
HMGB1P3-201ENST00000502802 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.21□□□□□ -1.73
HMGB1P3-201ENST00000502802 LRP5LA4QPB2 252 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 G3V3Y1 287 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 TAPBPO15533 448 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 ECI2O75521 394 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 ALOX5P09917 674 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 RNF224P0DH78 156 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 UMPSP11172 480 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 ACADSP16219 412 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 HOXB6P17509 224 aaKnown RBP4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 NCF2P19878 526 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 MAGEA8P43361 318 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 ALDH3B2P48448 385 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCT3P49368 545 aaKnown RBP4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 CASP4P49662 377 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 BEX3Q00994 111 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 LAGE3Q14657 143 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 CFAP221Q4G0U5 840 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 WSCD1Q658N2 575 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 TPGS2Q68CL5 300 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR4F3Q6IEY1 312 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 Q8N377 158 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 DHRSXQ8N5I4 330 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR2T33Q8NG76 320 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR5L2Q8NGL0 311 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR9A4Q8NGU2 314 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 AKR7LQ8NHP1 331 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 TFB1MQ8WVM0 346 aaKnown RBP4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 TRUB1Q8WWH5 349 aaKnown RBP4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 RBM14Q96PK6 669 aaKnown RBP4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCNL2Q96S94 520 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 ANP32EQ9BTT0 268 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 PKIBQ9C010 78 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZBP1Q9H171 429 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 LRRN3Q9H3W5 708 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 IKZF5Q9H5V7 419 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 VPS37BQ9H9H4 285 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 IMPAD1Q9NX62 359 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 SIGLEC8Q9NYZ4 499 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 IL36GQ9NZH8 169 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 SENP1Q9P0U3 644 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 RASD1Q9Y272 281 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 PXDNQ92626 1479 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 KIF1AQ12756 1690 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 NOTCH4Q99466 2003 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 USP32Q8NFA0 1604 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCDC144AA2RUR9 1427 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 RGS12O14924 1447 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 PIK3C2GO75747 1445 aa4.21□□□□□ -1.74
HMGB1P3-201ENST00000502802 PLCH1Q4KWH8 1693 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 MYOM2P54296 1465 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 NRXN1Q9ULB1 1477 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 LRPPRCP42704 1394 aaKnown RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ABCC11Q96J66 1382 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ANKRD30BQ9BXX2 1392 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PLEKHH1Q9ULM0 1364 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 CTAGE15A4D2H0 777 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 FAM47DPA6NHR8 397 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 SNTNA6NMZ2 147 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PRR23D1E9PI22 279 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 H3BMQ9 156 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 SGK1O00141 431 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF264O43296 627 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 HPP00738 406 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 RENP00797 406 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PRR23D2P0DMB1 279 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 TOP1P11387 765 aaKnown RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 POU2F1P14859 743 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 IDSP22304 550 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 MMP11P24347 488 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 HMGCLP35914 325 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 VLDLRP98155 873 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ST3GAL3Q11203 375 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 C1orf61Q13536 156 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 KCNJ11Q14654 390 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PPP1R3AQ16821 1122 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 TIGITQ495A1 244 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms