RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 MZT2BQ6NZ67 158 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 ZNF550Q7Z398 422 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 MCATQ8IVS2 390 aaKnown RBP15.29■□□□□ 0.04
VCAN-204ENST00000502527 ARHGEF39Q8N4T4 335 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 ARSGQ96EG1 525 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 SENP5Q96HI0 755 aaPredicted RBP15.29■□□□□ 0.04
VCAN-204ENST00000502527 FRMD6Q96NE9 622 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 NECTIN4Q96NY8 510 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 TNFRSF13CQ96RJ3 184 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 RNF121Q9H920 327 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 HAO2Q9NYQ3 351 aa15.29■□□□□ 0.04
VCAN-204ENST00000502527 RBMX2Q9Y388 322 aaKnown RBP15.29■□□□□ 0.04
VCAN-204ENST00000502527 THEGLP0DJG4 465 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 MYL9P24844 172 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 HOXD12P35452 270 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 KIR2DL3P43628 341 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ACTC1P68032 377 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ACTA1P68133 377 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 STX4Q12846 297 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 CRMP1Q14194 572 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 P2RY14Q15391 338 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ARHGAP11AQ6P4F7 1023 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 FRMD1Q8N878 549 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 C19orf47Q8N9M1 422 aaKnown RBP15.28■□□□□ 0.04
VCAN-204ENST00000502527 ZDHHC1Q8WTX9 485 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 CAPSLQ8WWF8 208 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ST6GAL2Q96JF0 529 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 OR2B2Q9GZK3 357 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ADGRL4Q9HBW9 690 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 DDX28Q9NUL7 540 aaKnown RBP15.28■□□□□ 0.04
VCAN-204ENST00000502527 MRPS33Q9Y291 106 aaKnown RBP15.28■□□□□ 0.04
VCAN-204ENST00000502527 N6AMT1Q9Y5N5 214 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ARHGEF17Q96PE2 2063 aaPredicted RBP15.28■□□□□ 0.04
VCAN-204ENST00000502527 BLACEA4D250 179 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 FAM25AB3EWG3 89 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 FAM25CB3EWG5 89 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 FAM25GB3EWG6 89 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 PLPP2O43688 288 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 IGKV1D-16P01601 117 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 CSF2P04141 144 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 MRPL3P09001 348 aaKnown RBP15.28■□□□□ 0.04
VCAN-204ENST00000502527 GSTT2P0CG29 244 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 GSTT2BP0CG30 244 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 PRKAR1AP10644 381 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 IL9P15248 144 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 MAP2K3P46734 347 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 C1orf61Q13536 156 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ZFP69Q49AA0 526 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 HBMQ6B0K9 141 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 TMEM53Q6P2H8 277 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ULK3Q6PHR2 472 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ARL9Q6T311 187 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 OR4N2Q8NGD1 307 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 SMPDL3BQ92485 455 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 ZC3HAV1LQ96H79 300 aaKnown RBP15.28■□□□□ 0.04
VCAN-204ENST00000502527 VSTM2LQ96N03 204 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 RBCK1Q9BYM8 510 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 MCCC2Q9HCC0 563 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 HCN3Q9P1Z3 774 aa15.28■□□□□ 0.04
VCAN-204ENST00000502527 LRP4O75096 1905 aa15.27■□□□□ 0.04
VCAN-204ENST00000502527 A0A0A6YYC8 382 aaPredicted RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 I3L1I5 382 aaPredicted RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 DVL2O14641 736 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 IDH3BO43837 385 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 CTNSO60931 367 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 IGLV3-19P01714 112 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 CTSBP07858 339 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 CHRNB1P11230 501 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 BLKP51451 505 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 PSMD4P55036 377 aaKnown RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 CRYZQ08257 329 aaKnown RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 GAS6Q14393 721 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 ZNF141Q15928 474 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 PRTGQ2VWP7 1150 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 TBRG1Q3YBR2 411 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 IDNKQ5T6J7 187 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 PLET1Q6UQ28 207 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 CYB561A3Q8NBI2 242 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 NLGN4YQ8NFZ3 816 aaPredicted RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 KCTD12Q96CX2 325 aaKnown RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 TOE1Q96GM8 510 aaKnown RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 C4orf36Q96KX1 117 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 SNX18Q96RF0 628 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 TMEM43Q9BTV4 400 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 RBFOX1Q9NWB1 397 aaKnown RBP15.27■□□□□ 0.03
VCAN-204ENST00000502527 RPS6KB2Q9UBS0 482 aa15.27■□□□□ 0.03
VCAN-204ENST00000502527 J3QLW9 94 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 SRPX2O60687 465 aaPredicted RBP15.26■□□□□ 0.03
VCAN-204ENST00000502527 ADAM11O75078 769 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 NGFRP08138 427 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 ZNF19P17023 458 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 ZNF85Q03923 595 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 CCINQ13939 588 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 FGFBP1Q14512 234 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 LINC00114Q6XXX2 140 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 VASH1Q7L8A9 365 aaPredicted RBP15.26■□□□□ 0.03
VCAN-204ENST00000502527 TPRA1Q86W33 373 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 ZNF595Q8IYB9 648 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 UBE2J2Q8N2K1 259 aa15.26■□□□□ 0.03
VCAN-204ENST00000502527 CADM2Q8N3J6 435 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms