RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	STX11	O75558	287 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SCRG1	O75711	98 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CDC123	O75794	336 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DNAJB5	O75953	348 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NKX2-2	O95096	273 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GADD45G	O95257	159 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	H6PD	O95479	791 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	LGI1	O95970	557 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DBI	P07108	87 aa	Known RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	LYN	P07948	512 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CHRM4	P08173	479 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GUSB	P08236	651 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CT62	P0C5K7	136 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	THRB	P10828	461 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ACP2	P11117	423 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ANXA8	P13928	327 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	AGXT	P21549	392 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PRKAR1B	P31321	381 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	RRM2	P31350	389 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PTGER1	P34995	402 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OR1E2	P47887	323 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CRYBA2	P53672	197 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	KRTAP10-11	P60412	298 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	POU6F2	P78424	691 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	BTG2	P78543	158 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DCD	P81605	110 aa	Known RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	VLDLR	P98155	873 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	E2F1	Q01094	437 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SPIB	Q01892	262 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF155	Q12901	538 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ERV3-1	Q14264	604 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF267	Q14586	743 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PDK3	Q15120	406 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MAPK11	Q15759	364 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DUSP5	Q16690	384 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DUSP7	Q16829	419 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SYT16	Q17RD7	645 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZSWIM7	Q19AV6	140 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MINDY4	Q4G0A6	757 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	LIN52	Q52LA3	116 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	EIPR1	Q53HC9	387 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NHSL2	Q5HYW2	709 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MLIP	Q5VWP3	458 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	KRT80	Q6KB66	452 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TBPL2	Q6SJ96	375 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CARM1	Q86X55	608 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	EPHX4	Q8IUS5	362 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	LINC00471	Q8N535	108 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	COX18	Q8N8Q8	333 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PLPP5	Q8NEB5	264 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PIK3C3	Q8NEB9	887 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OR52R1	Q8NGF1	315 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OR52P1P	Q8NH57	321 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GPR151	Q8TDV0	419 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GIPC3	Q8TF64	312 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TFAP2C	Q92754	450 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CDS1	Q92903	461 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DAZL	Q92904	295 aa	Known RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SDF2	Q99470	211 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	KCNJ15	Q99712	375 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PIP5K1A	Q99755	562 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	AMBRA1	Q9C0C7	1298 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GABARAPL1	Q9H0R8	117 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OR10A5	Q9H207	317 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SLC38A1	Q9H2H9	487 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ANKRA2	Q9H9E1	313 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF556	Q9HAH1	456 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ASCL3	Q9NQ33	180 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NECTIN3	Q9NQS3	549 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	LANCL2	Q9NS86	450 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	C14orf105	Q9NVL8	296 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CHCHD3	Q9NX63	227 aa	Known RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NDUFAF4	Q9P032	175 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PDP1	Q9P0J1	537 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ENOPH1	Q9UHY7	261 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	C3orf18	Q9UK00	162 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MRTO4	Q9UKD2	239 aa	Known RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TMCC3	Q9ULS5	477 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ABCG2	Q9UNQ0	655 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PCDHGA8	Q9Y5G5	932 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CLCA3P	Q9Y6N3	262 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	F8	P00451	2351 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CELSR2	Q9HCU4	2923 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GON4L	Q3T8J9	2241 aa		4.88	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ICE1	Q9Y2F5	2266 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TCRBV16S1A1N1	A0A5B0	115 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	EFCAB7	A8K855	629 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	C17orf105	B2RV13	164 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325		D6RAR5	112 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	AP3D1	O14617	1153 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SUSD5	O60279	629 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	UGT2B11	O75310	529 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DIRAS1	O95057	198 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CCNB2	O95067	398 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OXSR1	O95747	527 aa	Predicted RBP	4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ONECUT2	O95948	504 aa		4.87	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ALPL	P05186	524 aa		4.87	□□□□□ -1.63

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