RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RNF113BQ8IZP6 322 aaKnown RBP7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 STX19Q8N4C7 294 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 TCEANCQ8N8B7 351 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 LSMEM1Q8N8F7 131 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 ELOA3Q8NG57 546 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 OR8J1Q8NGP2 316 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 OR4Q3Q8NH05 313 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 RHOXF1Q8NHV9 184 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 ZNF563Q8TA94 476 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC22A8Q8TCC7 542 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 THAP3Q8WTV1 239 aaPredicted RBP7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 DNAJA4Q8WW22 397 aaPredicted RBP7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 FCGR1BQ92637 280 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 OSTF1Q92882 214 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 MYDGFQ969H8 173 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 TP53INP1Q96A56 240 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 TMIGD2Q96BF3 282 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 C3orf49Q96BT1 292 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 BPIFA2Q96DR5 249 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 POM121Q96HA1 1249 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 Q96MT0 163 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 IL4I1Q96RQ9 567 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 CCNL2Q96S94 520 aaPredicted RBP7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 TUBA1CQ9BQE3 449 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 ZNF426Q9BUY5 554 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 DDA1Q9BW61 102 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 TSSK6Q9BXA6 273 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 POLDIP3Q9BY77 421 aaKnown RBP7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 OR52D1Q9H346 318 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 DUSP21Q9H596 190 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 ATP13A2Q9NQ11 1180 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 C20orf141Q9NUB4 165 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 PLCXD1Q9NUJ7 323 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 TVP23BQ9NYZ1 205 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 RSL24D1Q9UHA3 163 aaKnown RBP7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 PSORS1C1Q9UIG5 152 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 PPIEQ9UNP9 301 aaKnown RBP7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 CARD8Q9Y2G2 431 aa7.4□□□□□ -1.22
PDZRN3-212ENST00000498048 PHF3Q92576 2039 aaKnown RBP7.4□□□□□ -1.23
PDZRN3-212ENST00000498048 TRAV27A0A087WT01 109 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 LOC102723996A0A087X1L8 192 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 PMS2P1A4D2B8 440 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 EFCAB10A6NFE3 127 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 C4orf47A7E2U8 309 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CLCA1A8K7I4 914 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 ALG1L2C9J202 215 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 WWP2O00308 870 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CDC42EP2O14613 210 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 HCRTR2O43614 444 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 NDUFB5O43674 189 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 PRKYO43930 277 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 GMFGO60234 142 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 HCN1O60741 890 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 NADKO95544 446 aaPredicted RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 NUDT14O95848 222 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 DLGAP3O95886 979 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CDK1P06493 297 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 DBTP11182 482 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 COX6A1P12074 109 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 PIPP12273 146 aaPredicted RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 FUT1P19526 365 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 MAKP20794 623 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 ENDOUP21128 410 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 PCMT1P22061 227 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 PSMB9P28065 219 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 GRK5P34947 590 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 MAP2K4P45985 399 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 MLLT10P55197 1068 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CDK5Q00535 292 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 EIF3IQ13347 325 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 SNAPC1Q16533 368 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 ISXQ2M1V0 245 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 BTBD16Q32M84 506 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 C3orf38Q5JPI3 329 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 HES3Q5TGS1 186 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 FAM69BQ5VUD6 431 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CDCP2Q5VXM1 449 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 SUMF1Q8NBK3 374 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 OR2T33Q8NG76 320 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 OR5L2Q8NGL0 311 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 OR13F1Q8NGS4 319 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 OR2Y1Q8NGV0 311 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 OR8K3Q8NH51 312 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 TMEM163Q8TC26 289 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 BRIX1Q8TDN6 353 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 FAR1Q8WVX9 515 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 RORBQ92753 470 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 ISOC1Q96CN7 298 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 NMD3Q96D46 503 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 SAMD8Q96LT4 415 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 TAAR9Q96RI9 348 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 SIGLEC11Q96RL6 698 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 TSC22D3Q99576 134 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 LAT2Q9GZY6 243 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 LHPPQ9H008 270 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CXorf56Q9H5V9 222 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 AKIRIN1Q9H9L7 192 aaPredicted RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 LIN28AQ9H9Z2 209 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 AMBNQ9NP70 447 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms