RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 POLDIP3Q9BY77 421 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 IL20Q9NYY1 176 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 OTOGLQ3ZCN5 2332 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 ENO4A6NNW6 628 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 C9orf172C9J069 976 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 TLX2O43763 284 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 MAN1A2O60476 641 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 ZFAND5O76080 213 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 NADKO95544 446 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 CH25HO95992 272 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 CELA2AP08217 269 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 COX6A1P12074 109 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 MASP1P48740 699 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 RPS18P62269 152 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 EMX1Q04741 257 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 SNAPC1Q16533 368 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 C3orf38Q5JPI3 329 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 WBP2NLQ6ICG8 309 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 BORAQ6PGQ7 559 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 C6orf15Q6UXA7 325 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 LINC00114Q6XXX2 140 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 TIPARPQ7Z3E1 657 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 OR5L2Q8NGL0 311 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 OR8K3Q8NH51 312 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 GGHQ92820 318 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 ZNF524Q96C55 264 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 DGCR14Q96DF8 476 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 DEPDC7Q96QD5 511 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 ZPBPQ9BS86 351 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 LHPPQ9H008 270 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 OR52D1Q9H346 318 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 GPR52Q9Y2T5 361 aa16.28■□□□□ 0.2
CHRNA4-206ENST00000498043 TRAV27A0A087WT01 109 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 EFCAB9A8MZ26 197 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 FADS1O60427 444 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 JUNBP17275 347 aaPredicted RBP16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 FXYD6P3P58550 94 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 MVKQ03426 396 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 TRIP6Q15654 476 aaKnown RBP16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 TMPRSS11FQ6ZWK6 438 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 PRSS48Q7RTY5 328 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 CLVS1Q8IUQ0 354 aaPredicted RBP16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 ZNF563Q8TA94 476 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 TRUB1Q8WWH5 349 aaKnown RBP16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 LAT2Q9GZY6 243 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 FOXJ2Q9P0K8 574 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 MYOTQ9UBF9 498 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 PADI1Q9ULC6 663 aa16.27■□□□□ 0.2
CHRNA4-206ENST00000498043 A0A087WUJ7 227 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 CCDC187A0A096LP49 1063 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 SH3D21A4FU49 640 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 OR2J2O76002 312 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 NUDT14O95848 222 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 DLGAP3O95886 979 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 ITPKBP27987 946 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 EFR3AQ14156 821 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 PGGHGQ32M88 737 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 TMEM201Q5SNT2 666 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 CACTIN-AS1Q8N1I8 211 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 CLDN22Q8N7P3 220 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 CT55Q8WUE5 264 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 LRR1Q96L50 414 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 SLC38A2Q96QD8 506 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 SIGLEC11Q96RL6 698 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 DEFB126Q9BYW3 111 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 FKBP14Q9NWM8 211 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 PCDHGA1Q9Y5H4 931 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 ELOA3DA6NLF2 546 aaPredicted RBP16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 INMTO95050 263 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 C21orf33P30042 268 aaPredicted RBP16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 ELOA3BQ3SY89 546 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 GTF2IRD2BQ6EKJ0 949 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 GTF2IRD2Q86UP8 949 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 ELOA3Q8NG57 546 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 OR2T33Q8NG76 320 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 OR52L1Q8NGH7 329 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 OR13F1Q8NGS4 319 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 OR51A7Q8NH64 312 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 BRIX1Q8TDN6 353 aaKnown RBP16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 FAR1Q8WVX9 515 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 MYDGFQ969H8 173 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 MUL1Q969V5 352 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 NMD3Q96D46 503 aaKnown RBP16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 ZNF700Q9H0M5 742 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 FREM2Q5SZK8 3169 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 SDK2Q58EX2 2172 aa16.26■□□□□ 0.19
CHRNA4-206ENST00000498043 CDK1P06493 297 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 STSP08842 583 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 TCN2P20062 427 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 TGM1P22735 817 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 SLC6A8P48029 635 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 TOMM34Q15785 309 aaPredicted RBP16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 SYT14P1Q58G82 188 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 MRGPREQ86SM8 312 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 ATG4DQ86TL0 474 aaPredicted RBP16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 STX19Q8N4C7 294 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 ELP5Q8TE02 316 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 Q96MT0 163 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 TUBA1CQ9BQE3 449 aa16.25■□□□□ 0.19
CHRNA4-206ENST00000498043 PRRG3Q9BZD7 231 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms